Uses of Interface
org.biojavax.bio.db.BioEntryDBLite

Packages that use BioEntryDBLite

Package	Description
org.biojavax.bio.db	Interactions between biojavax objects and a DB.
org.biojavax.bio.db.biosql	Interface between biojava and biosql databases
org.biojavax.bio.db.ncbi	Interfaces to NCBI data.

Uses of BioEntryDBLite in org.biojavax.bio.db

Subinterfaces of BioEntryDBLite in org.biojavax.bio.db

Modifier and Type	Interface and Description
interface	BioEntryDB .
interface	RichSequenceDB A database of RichSequences with accessible keys and iterators over all sequences.
interface	RichSequenceDBLite A database of RichSequences.

Classes in org.biojavax.bio.db that implement BioEntryDBLite

Modifier and Type	Class and Description
class	AbstractBioEntryDB An abstract implementation of BioEntryDB that provides the getBioEntryIterator method.
class	AbstractRichSequenceDB An abstract implementation of RichSequenceDB that provides the getRichSequenceIterator method.
class	HashBioEntryDB An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects.
class	HashRichSequenceDB An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects.

Uses of BioEntryDBLite in org.biojavax.bio.db.biosql

Classes in org.biojavax.bio.db.biosql that implement BioEntryDBLite

Modifier and Type	Class and Description
class	BioSQLBioEntryDB
class	BioSQLRichSequenceDB

Uses of BioEntryDBLite in org.biojavax.bio.db.ncbi

Classes in org.biojavax.bio.db.ncbi that implement BioEntryDBLite

Modifier and Type	Class and Description
class	GenbankRichSequenceDB This class contains functions accessing DNA sequences in Genbank format.
class	GenpeptRichSequenceDB This class contains functions accessing Peptide sequences in Genpept format.