Uses of Package
org.biojavax.bio

Packages that use org.biojavax.bio

Package	Description
org.biojavax	The Biojava extensions packages, classes that extend the core biojava functionality The biojavax packages contain a number of extensions to the core biojava interfaces.
org.biojavax.bio	Classes to represent biological entities and their relationships.
org.biojavax.bio.db	Interactions between biojavax objects and a DB.
org.biojavax.bio.db.biosql	Interface between biojava and biosql databases
org.biojavax.bio.seq	Rich implementations of Sequences, Locations and Features.
org.biojavax.bio.seq.io	Classes to support the I/O of RichSequence and Bioentry objects.

Classes in org.biojavax.bio used by org.biojavax

Class and Description
BioEntry This class relates to the bioentry table in BioSQL.

Classes in org.biojavax.bio used by org.biojavax.bio

Class and Description
BioEntry This class relates to the bioentry table in BioSQL.
BioEntryRelationship Represents the relation between two bioentries.

Classes in org.biojavax.bio used by org.biojavax.bio.db

Class and Description
BioEntry This class relates to the bioentry table in BioSQL.
BioEntryIterator Essentially the same as SequenceIterator.

Classes in org.biojavax.bio used by org.biojavax.bio.db.biosql

Class and Description
BioEntry This class relates to the bioentry table in BioSQL.

Classes in org.biojavax.bio used by org.biojavax.bio.seq

Class and Description
BioEntry This class relates to the bioentry table in BioSQL.
BioEntryIterator Essentially the same as SequenceIterator.
SimpleBioEntry Reference implementation of a BioEntry object which has no features or sequence.

Classes in org.biojavax.bio used by org.biojavax.bio.seq.io

Class and Description
BioEntry This class relates to the bioentry table in BioSQL.
BioEntryIterator Essentially the same as SequenceIterator.
BioEntryRelationship Represents the relation between two bioentries.