Uses of Interface
org.biojavax.ontology.ComparableOntology

Packages that use ComparableOntology

Package	Description
org.biojavax	The Biojava extensions packages, classes that extend the core biojava functionality The biojavax packages contain a number of extensions to the core biojava interfaces.
org.biojavax.bio.seq.io	Classes to support the I/O of RichSequence and Bioentry objects.
org.biojavax.ontology	Extensions to the biojava ontology model that represent BioSQL ontology.

Uses of ComparableOntology in org.biojavax

Methods in org.biojavax that return ComparableOntology

Modifier and Type	Method and Description
static ComparableOntology	RichObjectFactory.getDefaultOntology() Returns the default ontology object.

Uses of ComparableOntology in org.biojavax.bio.seq.io

Methods in org.biojavax.bio.seq.io that return ComparableOntology

Modifier and Type	Method and Description
static ComparableOntology	UniProtXMLFormat.Terms.getUniprotKWOnto() Getter for the private uniprot ontology.

Uses of ComparableOntology in org.biojavax.ontology

Classes in org.biojavax.ontology that implement ComparableOntology

Modifier and Type	Class and Description
class	SimpleComparableOntology Represents an ontology that can be compared to other ontologies.