public class MySaveFileListener extends Object implements ActionListener
The format to save the alignment depends on the Frame that generated the Action: from a sequence alignment a FatCat or FASTA formats are saved, and from a Jmol view an XML format is saved.
Constructor and Description |
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MySaveFileListener(AFPChain afpChain) |
MySaveFileListener(AFPChain afpChain,
MultipleAlignment msa)
Constructor to avoid checking which of the two is null before
instantiating this class.
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MySaveFileListener(MultipleAlignment msa) |
Modifier and Type | Method and Description |
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void |
actionPerformed(ActionEvent evt) |
void |
setTextOutput(boolean text)
If true, the alignment format saved will be a text output (FASTA for
MultipleAlignments and FatCat for pairwise alignments)
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public MySaveFileListener(AFPChain afpChain)
public MySaveFileListener(MultipleAlignment msa)
public MySaveFileListener(AFPChain afpChain, MultipleAlignment msa)
afpChain
- msa
- public void actionPerformed(ActionEvent evt)
actionPerformed
in interface ActionListener
public void setTextOutput(boolean text)
text
- if true the output will be text formatCopyright © 2000–2016 BioJava. All rights reserved.