001/*
002 *                    BioJava development code
003 *
004 * This code may be freely distributed and modified under the
005 * terms of the GNU Lesser General Public Licence.  This should
006 * be distributed with the code.  If you do not have a copy,
007 * see:
008 *
009 *      http://www.gnu.org/copyleft/lesser.html
010 *
011 * Copyright for this code is held jointly by the individual
012 * authors.  These should be listed in @author doc comments.
013 *
014 * For more information on the BioJava project and its aims,
015 * or to join the biojava-l mailing list, visit the home page
016 * at:
017 *
018 *      http://www.biojava.org/
019 *
020 */
021package org.biojava.nbio.aaproperties.xml;
022
023import javax.xml.bind.annotation.XmlAccessType;
024import javax.xml.bind.annotation.XmlAccessorType;
025import javax.xml.bind.annotation.XmlAttribute;
026import javax.xml.bind.annotation.XmlType;
027
028
029@XmlType(name = "Iostope", propOrder = {"name","neutronsNum","mass"})
030@XmlAccessorType(XmlAccessType.NONE)
031public class Isotope {
032        /**
033         * The isotope name i.e. T (tritium)
034         */
035        @XmlAttribute(name = "name", required = true)
036        private String name;
037        /**
038         * Number of neutrons
039         */
040        @XmlAttribute(name = "neutronsnum", required = true)
041        private int neutronsNum;
042        /**
043         * Relative Atomic Mass of the isotope
044         */
045        @XmlAttribute(name = "mass", required = true)
046        private double mass;
047
048        public Isotope(){}
049
050        public Isotope(String name, int neutronsNum, double mass){
051                if(neutronsNum <= 0){
052                        throw new Error("Neutrons number of Isotopes must be > 0.");
053                }
054                if(mass <= 0){
055                        throw new Error("Mass of Isotopes must be > 0.");
056                }
057                this.setName(name);
058                this.setNeutronsNum(neutronsNum);
059                this.setMass(mass);
060        }
061
062        public String getName(){
063                return this.name;
064        }
065
066        public void setName(String name) {
067                this.name = name;
068        }
069
070        public int getNeutronsNum() {
071                return neutronsNum;
072        }
073
074        public void setNeutronsNum(int neutronsNum) {
075                this.neutronsNum = neutronsNum;
076        }
077
078        public double getMass() {
079                return mass;
080        }
081
082        public void setMass(double weight) {
083                this.mass = weight;
084        }
085}