From BioJava

Contents 1 BioJava 3 1.1 Status 1.2 Availability 1.3 IDE specific instructions 1.4 Wanted 1.5 Mailing List 1.6 Coding conventions 1.7 Links

BioJava 3

Status

Coding has started in the BioJava SVN repository. At the present we are at an alpha stage.

Availability

At the moment we only recommend developers to checkout the source code. Check it out via

svn co svn+ssh://dev.open-bio.org/home/svn-repositories/biojava/biojava-live/trunk/

If you just want to see what is going on browse the code at http://code.open-bio.org/svnweb/index.cgi/biojava/browse/biojava-live/trunk

Anonymous checkout is possible at

svn co svn://code.open-bio.org/biojava/biojava-live/trunk/

IDE specific instructions

• BioJava3_eclipse how to work with BioJava3 using eclipse

Wanted

We need a volunteer to migrate/rewrite the Blast parsing framework from BioJava 1

Mailing List

All discussions are on http://www.biojava.org/mailman/listinfo/biojava-dev

Coding conventions

• We are using Maven to build biojava 3
• BioJava3_license - All source code of BioJava 3 is under LGPL.
• BioJava3_logging - How to use logging

Links

• BioJava3_Proposal