Uses of Class
org.biojava.nbio.alignment.Alignments.PairInProfileScorerType
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Packages that use Alignments.PairInProfileScorerType Package Description org.biojava.nbio.alignment org.biojava.nbio.alignment.template -
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Uses of Alignments.PairInProfileScorerType in org.biojava.nbio.alignment
Methods in org.biojava.nbio.alignment that return Alignments.PairInProfileScorerType Modifier and Type Method Description Alignments.PairInProfileScorerType
StandardRescoreRefiner. getPairInProfileScorer()
static Alignments.PairInProfileScorerType
Alignments.PairInProfileScorerType. valueOf(String name)
Returns the enum constant of this type with the specified name.static Alignments.PairInProfileScorerType[]
Alignments.PairInProfileScorerType. values()
Returns an array containing the constants of this enum type, in the order they are declared.Constructors in org.biojava.nbio.alignment with parameters of type Alignments.PairInProfileScorerType Constructor Description StandardRescoreRefiner(Alignments.PairInProfileScorerType pips, Alignments.ProfileProfileAlignerType ppa)
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Uses of Alignments.PairInProfileScorerType in org.biojava.nbio.alignment.template
Methods in org.biojava.nbio.alignment.template that return Alignments.PairInProfileScorerType Modifier and Type Method Description Alignments.PairInProfileScorerType
RescoreRefiner. getPairInProfileScorer()
Returns class type of pairwise scoring subroutine.
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