MySaveFileListener (biojava 5.2.0 API)

java.lang.Object
- org.biojava.nbio.structure.align.gui.MySaveFileListener

All Implemented Interfaces:

ActionListener, EventListener
```
public class MySaveFileListener
extends Object
implements ActionListener
```
Save an alignment to a specified File by the user. The alignment to be saved depends on the constructor used to instantiate this class, so that AFPChains and MultipleAlignments can be saved.
The format to save the alignment depends on the Frame that generated the Action: from a sequence alignment a FatCat or FASTA formats are saved, and from a Jmol view an XML format is saved.

Version:

2.0 - adapted for MultipleAligments

Author:

Aleix Lafita

Constructor Summary

Constructors
Constructor	Description
`MySaveFileListener(AFPChain afpChain)`
`MySaveFileListener(AFPChain afpChain, MultipleAlignment msa)`	Constructor to avoid checking which of the two is null before instantiating this class.
`MySaveFileListener(MultipleAlignment msa)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`actionPerformed(ActionEvent evt)`
`void`	`setTextOutput(boolean text)`	If true, the alignment format saved will be a text output (FASTA for MultipleAlignments and FatCat for pairwise alignments)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - MySaveFileListener
```
public MySaveFileListener(AFPChain afpChain)
```
  - MySaveFileListener
```
public MySaveFileListener(MultipleAlignment msa)
```
  - MySaveFileListener
```
public MySaveFileListener(AFPChain afpChain,
                          MultipleAlignment msa)
```
    Constructor to avoid checking which of the two is null before instantiating this class. One of the two, or both, have to be null. If both are different than null the MultipleAlignment will be saved only.
    
    Parameters:
    
    afpChain -
    
    msa -
- Method Detail
  - actionPerformed
```
public void actionPerformed(ActionEvent evt)
```
    Specified by:
    
    actionPerformed in interface ActionListener
  - setTextOutput
```
public void setTextOutput(boolean text)
```
    If true, the alignment format saved will be a text output (FASTA for MultipleAlignments and FatCat for pairwise alignments)
    
    Parameters:
    
    text - if true the output will be text format