Package org.biojava.nbio.structure.cluster

package org.biojava.nbio.structure.cluster

Related Packages

Package	Description
org.biojava.nbio.structure	Interfaces and classes for protein structure (PDB).

Class	Description
Subunit	A Subunit consists of a set of residues from a Structure, which may correspond to an entire Chain, a Domain, or any subset or combination of residues from them.
SubunitCluster	A SubunitCluster contains a set of equivalent QuatSymmetrySubunits, the set of equivalent residues (EQR) between Subunit and a Subunit representative.
SubunitClusterer	The SubunitClusterer takes as input a collection of Subunit and returns a collection of SubunitCluster.
SubunitClustererMethod	The SubunitClustererMethod ennummerates all methods that can be used to cluster Subunit in the SubunitCluster.
SubunitClustererParameters	The SubunitClustererParameters specifies the options used for the clustering of the subunits in structures using the SubunitClusterer.
SubunitExtractor	The SubunitExtractor extracts the information of each protein Chain in a Structure and converts them into a List of Subunit.