Uses of Class
org.biojava.nbio.structure.contact.StructureInterface
Packages that use StructureInterface
-
Uses of StructureInterface in org.biojava.nbio.structure.contact
Methods in org.biojava.nbio.structure.contact that return StructureInterfaceModifier and TypeMethodDescriptionStructureInterfaceList.get
(int id) Gets the interface corresponding to given id.Methods in org.biojava.nbio.structure.contact that return types with arguments of type StructureInterfaceModifier and TypeMethodDescriptionStructureInterfaceList.getList()
StructureInterfaceCluster.getMembers()
StructureInterfaceList.iterator()
Methods in org.biojava.nbio.structure.contact with parameters of type StructureInterfaceModifier and TypeMethodDescriptionvoid
StructureInterfaceList.add
(StructureInterface interf) boolean
StructureInterfaceCluster.addMember
(StructureInterface interf) void
StructureInterfaceList.addNcsEquivalent
(StructureInterface interfaceNew, StructureInterface interfaceRef) Add an interface to the list, possibly defining it as NCS-equivalent to an interface already in the list.int
StructureInterface.compareTo
(StructureInterface o) double
StructureInterface.getContactOverlapScore
(StructureInterface other, boolean invert) Calculates the Jaccard contact set score (intersection over union) between this StructureInterface and the given one.Method parameters in org.biojava.nbio.structure.contact with type arguments of type StructureInterfaceModifier and TypeMethodDescriptionvoid
StructureInterfaceCluster.setMembers
(List<StructureInterface> members)