public class LocalProteinDomainParser extends Object
J Mol Biol. 2004 Jun 4;339(3):647-78. Toward consistent assignment of structural domains in proteins. Veretnik S, Bourne PE, Alexandrov NN, Shindyalov IN.This implementation is based on a Java port of the PDP algorithm, as described in:
|Modifier and Type||Method and Description|
Suggest domains for a set of Calpha atoms
Suggest domains for a protein structure
public static List<Domain> suggestDomains(Structure s) throws StructureException
s- the protein structure
Copyright © 2000–2019 BioJava. All rights reserved.