Package org.biojava.nbio.structure.io.sifts

Class SiftsChainEntry

java.lang.Object

org.biojava.nbio.structure.io.sifts.SiftsChainEntry

public class SiftsChainEntry
extends Object

An entry in the chain-level SIFTS mapping between UniProt and the PDB.

Since:

3.0.7

Author:

dmyersturnbull

See Also:

• SiftsChainToUniprotMapping
• Which is a distinct concept

Constructor Summary

Constructors

Constructor	Description
SiftsChainEntry(String pdbId, String chainId, String uniProtId, String seqresStart, String seqresEnd, String pdbStart, String pdbEnd, String uniprotStart, String uniprotEnd)

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object obj)
String	getChainId()
String	getPdbEnd()
String	getPdbId()
String	getPdbStart()
String	getSeqresEnd()
String	getSeqresStart()
String	getUniprotEnd()
String	getUniProtId()
String	getUniprotStart()
int	hashCode()
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details

SiftsChainEntry

public SiftsChainEntry(String pdbId,
 String chainId,
 String uniProtId,
 String seqresStart,
 String seqresEnd,
 String pdbStart,
 String pdbEnd,
 String uniprotStart,
 String uniprotEnd)

Method Details

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

getChainId

public String getChainId()

getPdbEnd

public String getPdbEnd()

Returns:

A residue number

getPdbId

public String getPdbId()

getPdbStart

public String getPdbStart()

Returns:

A residue number

getSeqresEnd

public String getSeqresEnd()

Returns:

A residue number

getSeqresStart

public String getSeqresStart()

Returns:

A residue number

getUniprotEnd

public String getUniprotEnd()

getUniProtId

public String getUniProtId()

getUniprotStart

public String getUniprotStart()

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object