001/*
002 *                    BioJava development code
003 *
004 * This code may be freely distributed and modified under the
005 * terms of the GNU Lesser General Public Licence.  This should
006 * be distributed with the code.  If you do not have a copy,
007 * see:
008 *
009 *      http://www.gnu.org/copyleft/lesser.html
010 *
011 * Copyright for this code is held jointly by the individual
012 * authors.  These should be listed in @author doc comments.
013 *
014 * For more information on the BioJava project and its aims,
015 * or to join the biojava-l mailing list, visit the home page
016 * at:
017 *
018 *      http://www.biojava.org/
019 *
020 * Created on 01-21-2010
021 *
022 * @author Richard Holland
023 *
024 *
025 */
026package org.biojava.nbio.core.sequence.template;
027
028
029public interface SequenceView<C extends Compound> extends Sequence<C> {
030
031        public Sequence<C> getViewedSequence();
032
033        /**
034         * 1-indexed, inclusive.
035         */
036        public Integer getBioStart();
037
038        /**
039         * 1-indexed, inclusive.
040         */
041        public Integer getBioEnd();
042}