001/*
002 *                    BioJava development code
003 *
004 * This code may be freely distributed and modified under the
005 * terms of the GNU Lesser General Public Licence.  This should
006 * be distributed with the code.  If you do not have a copy,
007 * see:
008 *
009 *      http://www.gnu.org/copyleft/lesser.html
010 *
011 * Copyright for this code is held jointly by the individual
012 * authors.  These should be listed in @author doc comments.
013 *
014 * For more information on the BioJava project and its aims,
015 * or to join the biojava-l mailing list, visit the home page
016 * at:
017 *
018 *      http://www.biojava.org/
019 *
020 */
021package org.biojava.nbio.structure.align.ce;
022
023import org.biojava.nbio.structure.align.util.ConfigurationException;
024
025public interface UserArgumentProcessor {
026
027
028        /** Process user arguments that have been provided from the command line
029         *
030         * @param argv
031         */
032        public void process(String[] argv) throws ConfigurationException;
033
034        /**
035         * Print help about the arguments
036         * @return
037         */
038        public String printHelp();
039}