Package | Description |
---|---|
org.biojava.bio.program.homologene |
Support classes for Homologene data.
|
Modifier and Type | Class and Description |
---|---|
static class |
OrthoPairSetFilter.AcceptAll |
static class |
OrthoPairSetFilter.AllPairsInCollection
all OrthoPairs must meet the requirement
defined by filter.
|
static class |
OrthoPairSetFilter.And |
static class |
OrthoPairSetFilter.ByMinIdentity |
static class |
OrthoPairSetFilter.ByTaxon |
static class |
OrthoPairSetFilter.Not |
static class |
OrthoPairSetFilter.Or |
static class |
OrthoPairSetFilter.SomePairsInCollection
at least one OrthoPair must meet the requirement
defined by filter.
|
static class |
OrthoPairSetFilter.Xor |
Modifier and Type | Method and Description |
---|---|
OrthoPairCollection |
OrthoPairCollection.filter(OrthoPairSetFilter filters) |
OrthoPairCollection |
HomologeneDB.filter(OrthoPairSetFilter filters)
Filter the database for a specified group.
|
OrthoPairCollection |
AbstractOrthoPairCollection.filter(OrthoPairSetFilter filters) |
Constructor and Description |
---|
OrthoPairSetFilter.And(OrthoPairSetFilter a,
OrthoPairSetFilter b) |
OrthoPairSetFilter.Not(OrthoPairSetFilter a) |
OrthoPairSetFilter.Or(OrthoPairSetFilter a,
OrthoPairSetFilter b) |
OrthoPairSetFilter.Xor(OrthoPairSetFilter a,
OrthoPairSetFilter b) |
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