001/* 002 * BioJava development code 003 * 004 * This code may be freely distributed and modified under the 005 * terms of the GNU Lesser General Public Licence. This should 006 * be distributed with the code. If you do not have a copy, 007 * see: 008 * 009 * http://www.gnu.org/copyleft/lesser.html 010 * 011 * Copyright for this code is held jointly by the individual 012 * authors. These should be listed in @author doc comments. 013 * 014 * For more information on the BioJava project and its aims, 015 * or to join the biojava-l mailing list, visit the home page 016 * at: 017 * 018 * http://www.biojava.org/ 019 * 020 */ 021 022package org.biojava.bio.gui.sequence; 023 024import java.awt.Font; 025import java.awt.Point; 026import java.awt.geom.Point2D; 027 028import org.biojava.bio.seq.FeatureHolder; 029import org.biojava.bio.symbol.RangeLocation; 030import org.biojava.bio.symbol.SymbolList; 031 032/** 033 * <p><code>SubPairwiseRenderContext</code> is a rendering context 034 * which wraps a delegate context and effectively hides some of the 035 * delegate's properties with its own. If any of the 036 * <code>SymbolList</code>, <code>FeatureHolder</code> or 037 * <code>RangeLocation</code> arguments are not null, their values are 038 * returned. Otherwise the delegate's method is called and its return 039 * value is returned instead.</p> 040 * 041 * @author Keith James 042 * @author Matthew Pocock 043 * @since 1.2 044 */ 045public class SubPairwiseRenderContext implements PairwiseRenderContext 046{ 047 private final PairwiseRenderContext context; 048 private final SymbolList symbols; 049 private final SymbolList secondarySymbols; 050 private final FeatureHolder features; 051 private final FeatureHolder secondaryFeatures; 052 private final RangeLocation range; 053 private final RangeLocation secondaryRange; 054 055 /** 056 * Creates a new <code>SubPairwiseRenderContext</code>. 057 * 058 * @param context a <code>PairwiseRenderContext</code> to 059 * wrap. This should not be null. 060 * @param symbols a <code>SymbolList</code> to use instead of the 061 * delegate's. May be null. 062 * @param secondarySymbols a <code>SymbolList</code> to use 063 * instead of the delegate's. May be null. 064 * @param features a <code>FeatureHolder</code> to use instead of 065 * the delegate's. May be null. 066 * @param secondaryFeatures a <code>FeatureHolder</code> to use 067 * instead of the delegate's. May be null. 068 * @param range a <code>RangeLocation</code> to use instead of the 069 * delegate's. May be null. 070 * @param secondaryRange a <code>RangeLocation</code> to use 071 * instead of the delegate's. May be null. 072 */ 073 public SubPairwiseRenderContext(PairwiseRenderContext context, 074 SymbolList symbols, 075 SymbolList secondarySymbols, 076 FeatureHolder features, 077 FeatureHolder secondaryFeatures, 078 RangeLocation range, 079 RangeLocation secondaryRange) 080 { 081 this.context = context; 082 this.symbols = symbols; 083 this.secondarySymbols = secondarySymbols; 084 this.features = features; 085 this.secondaryFeatures = secondaryFeatures; 086 this.range = range; 087 this.secondaryRange = secondaryRange; 088 } 089 090 public SymbolList getSymbols() 091 { 092 if (symbols == null) 093 { 094 return context.getSymbols(); 095 } 096 else 097 { 098 return symbols; 099 } 100 } 101 102 public SymbolList getSecondarySymbols() 103 { 104 if (secondarySymbols == null) 105 { 106 return context.getSecondarySymbols(); 107 } 108 else 109 { 110 return secondarySymbols; 111 } 112 } 113 114 public FeatureHolder getFeatures() 115 { 116 if (features == null) 117 { 118 return context.getFeatures(); 119 } 120 else 121 { 122 return features; 123 } 124 } 125 126 public FeatureHolder getSecondaryFeatures() 127 { 128 if (secondaryFeatures == null) 129 { 130 return context.getSecondaryFeatures(); 131 } 132 else 133 { 134 return secondaryFeatures; 135 } 136 } 137 138 public RangeLocation getRange() 139 { 140 if (range == null) 141 { 142 return context.getRange(); 143 } 144 else 145 { 146 return range; 147 } 148 } 149 150 public RangeLocation getSecondaryRange() 151 { 152 if (secondaryRange == null) 153 { 154 return context.getSecondaryRange(); 155 } 156 else 157 { 158 return secondaryRange; 159 } 160 } 161 162 public int getDirection() 163 { 164 return context.getDirection(); 165 } 166 167 public int getSecondaryDirection() 168 { 169 return context.getSecondaryDirection(); 170 } 171 172 public double getScale() 173 { 174 return context.getScale(); 175 } 176 177 public SequenceRenderContext.Border getLeadingBorder() 178 { 179 return context.getLeadingBorder(); 180 } 181 182 public SequenceRenderContext.Border getTrailingBorder() 183 { 184 return context.getTrailingBorder(); 185 } 186 187 public double sequenceToGraphics(int sequencePos) 188 { 189 return context.sequenceToGraphics(sequencePos); 190 } 191 192 public double secondarySequenceToGraphics(int sequencePos) 193 { 194 return context.secondarySequenceToGraphics(sequencePos); 195 } 196 197 public int graphicsToSequence(double graphicsPos) 198 { 199 return context.graphicsToSequence(graphicsPos); 200 } 201 202 public int graphicsToSequence(Point2D point) 203 { 204 return context.graphicsToSequence(point); 205 } 206 207 public int graphicsToSecondarySequence(double graphicsPos) 208 { 209 return context.graphicsToSecondarySequence(graphicsPos); 210 } 211 212 public int graphicsToSecondarySequence(Point point) 213 { 214 return context.graphicsToSecondarySequence(point); 215 } 216 217 public Font getFont() 218 { 219 return context.getFont(); 220 } 221}