001/* 002 * BioJava development code 003 * 004 * This code may be freely distributed and modified under the 005 * terms of the GNU Lesser General Public Licence. This should 006 * be distributed with the code. If you do not have a copy, 007 * see: 008 * 009 * http://www.gnu.org/copyleft/lesser.html 010 * 011 * Copyright for this code is held jointly by the individual 012 * authors. These should be listed in @author doc comments. 013 * 014 * For more information on the BioJava project and its aims, 015 * or to join the biojava-l mailing list, visit the home page 016 * at: 017 * 018 * http://www.biojava.org/ 019 * 020 */ 021 022 023package org.biojava.bio.seq.io; 024 025import org.biojava.bio.symbol.IllegalSymbolException; 026 027/** 028 * Parse a stream of characters into BioJava symbols. 029 * 030 * @author Thomas Down 031 * @since 1.1 032 */ 033 034public interface StreamParser { 035 public void characters(char[] data, int start, int len) 036 throws IllegalSymbolException; 037 038 public void close() 039 throws IllegalSymbolException; 040}