Package org.biojava.bio.dp.twohead
Interface CellCalculatorFactory
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- All Known Implementing Classes:
DPInterpreter
public interface CellCalculatorFactory
- Author:
- Matthew Pocock
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description CellCalculatorbackwards(ScoreType scoreType)CellCalculatorforwards(ScoreType scoreType)CellCalculatorviterbi(ScoreType scoreType, BackPointer terminal)
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Method Detail
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forwards
CellCalculator forwards(ScoreType scoreType) throws IllegalSymbolException, IllegalAlphabetException, IllegalTransitionException
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backwards
CellCalculator backwards(ScoreType scoreType) throws IllegalSymbolException, IllegalAlphabetException, IllegalTransitionException
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viterbi
CellCalculator viterbi(ScoreType scoreType, BackPointer terminal) throws IllegalSymbolException, IllegalAlphabetException, IllegalTransitionException
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