Package org.biojava.bio.gui

Class TextLogoPainter

java.lang.Object

org.biojava.bio.gui.TextLogoPainter

All Implemented Interfaces:

LogoPainter

public class TextLogoPainter
extends Object
implements LogoPainter

A logo painter that paints in stacked letters. The total height of the letters is proportional to the total informaton in the state. The height of each letter is proportional to its emission probability. The most likely letter is drawn highest.

Author:

Matthew Pocock

Constructor Summary

Constructors

Constructor	Description
TextLogoPainter()

Method Summary

Modifier and Type	Method	Description
void	addPropertyChangeListener(PropertyChangeListener listener)
void	addPropertyChangeListener(String propertyName, PropertyChangeListener listener)
void	firePropertyChange(PropertyChangeEvent evt)
void	firePropertyChange(String propertyName, boolean oldValue, boolean newValue)
void	firePropertyChange(String propertyName, int oldValue, int newValue)
void	firePropertyChange(String propertyName, Object oldValue, Object newValue)
Font	getLogoFont()	Retrieve the current font.
boolean	hasListeners(String propertyName)
void	paintLogo(LogoContext ctxt)	Render the state from sl onto the graphics object g.
void	removePropertyChangeListener(PropertyChangeListener listener)
void	removePropertyChangeListener(String propertyName, PropertyChangeListener listener)
void	setLogoFont(Font logoFont)	Set the current logo font.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TextLogoPainter

public TextLogoPainter()

Method Detail

getLogoFont

public Font getLogoFont()

Retrieve the current font.

Returns:

the current logo font

setLogoFont

public void setLogoFont(Font logoFont)

Set the current logo font.

Parameters:

logoFont - the new Font to render the logo letters in

addPropertyChangeListener

public void addPropertyChangeListener(PropertyChangeListener listener)

removePropertyChangeListener

public void removePropertyChangeListener(PropertyChangeListener listener)

addPropertyChangeListener

public void addPropertyChangeListener(String propertyName,
                                      PropertyChangeListener listener)

removePropertyChangeListener

public void removePropertyChangeListener(String propertyName,
                                         PropertyChangeListener listener)

firePropertyChange

public void firePropertyChange(String propertyName,
                               Object oldValue,
                               Object newValue)

firePropertyChange

public void firePropertyChange(String propertyName,
                               int oldValue,
                               int newValue)

firePropertyChange

public void firePropertyChange(String propertyName,
                               boolean oldValue,
                               boolean newValue)

firePropertyChange

public void firePropertyChange(PropertyChangeEvent evt)

hasListeners

public boolean hasListeners(String propertyName)

paintLogo

public void paintLogo(LogoContext ctxt)

Description copied from interface: LogoPainter

Render the state from sl onto the graphics object g.

Specified by:

paintLogo in interface LogoPainter

Parameters:

ctxt - the LogoContext to render