ABI Trace Handling.
The ABI trace file format is a proprietary file format that has achieved the status orf a de facto standard given the dominance of the company in sequencing technology.
Interface Summary Interface Description ABIFParser.DataAccess
Class Summary Class Description ABIFChromatogramAn implementation of
Chromatogramto encapulsulate chromatogram data extracted from the files produced by ABI sequencers, such as the the 377 and the 3700.
ABIFParserA general base parser for files produced by ABI software. ABIFParser.TaggedDataRecordAn aggregate immutable type for an ABIF tagged data record. ABIToolsUseful functionality for working with fasta files where the quality of the DNA is encoded as upper and lower case DNA characters. ABITraceTitle: ABITrace
ABITrace is a class for managing ABI file information, it is capable of opening an ABI file and storing the most important fields, which can be recalled as simple java types.