Class Blast2HTMLHandler

  • All Implemented Interfaces:
    ContentHandler, DTDHandler, EntityResolver, ErrorHandler

    public class Blast2HTMLHandler
    extends DefaultHandler
    Takes a SAX event stream and a HTMLRenderer to produce a HTML Blast like program report. Primary author - Colin Hardman (CAT) Other authors - Tim Dilks (CAT) Simon Brocklehurst (CAT) Stuart Johnston (CAT) Lawerence Bower (CAT) Derek Crockford (CAT) Neil Benn (CAT) Copyright 2001 Cambridge Antibody Technology Group plc. This code released to the biojava project, May 2001 under the LGPL license.
    Cambridge Antibody Technology Group plc, Greg Cox
    • Constructor Detail

      • Blast2HTMLHandler

        public Blast2HTMLHandler​(HTMLRenderer poRenderer)
        A content handler for rendering blast like outputs into HTML.
        poRenderer - HTMLRenderer - a configured HTMLRenderer.
    • Method Detail

      • startElement

        public void startElement​(String poNameSpace,
                                 String poElementName,
                                 String poQName,
                                 Attributes poAtts)
                          throws SAXException
        This is called when an element is entered. That is, the parser has met the first tag of the tag pair.
        Specified by:
        startElement in interface ContentHandler
        startElement in class DefaultHandler
        poNameSpace - String - the name space.
        poElementName - String - the local name of the tag.
        poQName - String - the fully qualified name with prefix
        poAtts - an Attributes - the tag attributes.
        SAXException - if an error occurs
      • endElement

        public void endElement​(String poNameSpace,
                               String poElementName,
                               String poQName)
        Called when the end of an element is reached.
        Specified by:
        endElement in interface ContentHandler
        endElement in class DefaultHandler
        poNameSpace - a String - the name space.
        poElementName - a String - the local element name.
        poQName - a String value - the qualified element name.
      • characters

        public void characters​(char[] charBuffer,
                               int start,
                               int length)
        Describe characters method here.
        Specified by:
        characters in interface ContentHandler
        characters in class DefaultHandler
        charBuffer - - character array containing data.
        start - - the start position of relavent chars in passes array
        length - - the stop position of relavent chars in passes array