Package org.biojava.bio.program.ssbind

Class HSPSummaryStAXHandler

java.lang.Object

org.biojava.utils.stax.StAXContentHandlerBase

org.biojava.bio.program.ssbind.SeqSimilarityStAXHandler

org.biojava.bio.program.ssbind.HSPSummaryStAXHandler

All Implemented Interfaces:

StAXContentHandler

public class HSPSummaryStAXHandler
extends SeqSimilarityStAXHandler

HSPSummaryStAXHandler handles the HSPSummary element of BioJava BlastLike XML.

Since:

1.3

Author:

Keith James

Field Summary

Fields

Modifier and Type	Field	Description
static StAXHandlerFactory	HSPSUMMARY_HANDLER_FACTORY

Fields inherited from class org.biojava.bio.program.ssbind.SeqSimilarityStAXHandler

ssContext

Method Summary

Modifier and Type	Method	Description
protected void	handleStartElement(String nsURI, String localName, String qName, Attributes attrs)

Methods inherited from class org.biojava.bio.program.ssbind.SeqSimilarityStAXHandler

addHandler, endElement, handleEndElement, startElement

Methods inherited from class org.biojava.utils.stax.StAXContentHandlerBase

characters, endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

HSPSUMMARY_HANDLER_FACTORY

public static final StAXHandlerFactory HSPSUMMARY_HANDLER_FACTORY

Method Detail

handleStartElement

protected void handleStartElement(String nsURI,
                                  String localName,
                                  String qName,
                                  Attributes attrs)
                           throws SAXException

Overrides:

handleStartElement in class SeqSimilarityStAXHandler

Throws:

SAXException