Package org.biojava.bio.search
Class SearchContentFilter
- java.lang.Object
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- org.biojava.bio.search.SearchContentFilter
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- All Implemented Interfaces:
SearchContentHandler
public class SearchContentFilter extends Object implements SearchContentHandler
Filtering implementation of SearchContentHandler that by default passes all messages on to the next delegate in the chain.
In this handler, all info will be passed onto a delegate handler. You can build up a chain of filters by using one filter as the delegate for another. When you over-ride a method in a filter, you can modify any state you wish. If you want that to propogate on, you should call the method on yourself via super.(), if not, just return.
It is your responsibility to ensure that the events emitted from your filter are sensible. In particular, start/end messages must be paired even after filtering.
Example
// we have a handler from somewhere SearchContentHandler handler = ...; // now we are going to mutate all "score" notifications to Double instances // from strings SearchContentHandler filter = new SearchContentFilter() { public void addHitProperty(Object key, Object value) { if("score".equals(key)) { if(value instanceof String) { value = new Double(value); } } super(key, value); } };
- Since:
- 1.3
- Author:
- Matthew Pocock
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Constructor Summary
Constructors Constructor Description SearchContentFilter(SearchContentHandler delegate)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
addHitProperty(Object key, Object value)
TheaddHitProperty
method adds a key/value pair containing some property of a particular hit.void
addSearchProperty(Object key, Object value)
TheaddSearchProperty
method adds a key/value pair containing some property of the overall search result.void
addSubHitProperty(Object key, Object value)
TheaddSubHitProperty
method adds a key/value pair containing some property of a particular subhit.void
endHeader()
TheendHeader
method indicates the end of a formatted header.void
endHit()
TheendHit
method indicates the end of a formatted hit.void
endSearch()
TheendSearch
method indicates the end of useful search information.void
endSubHit()
TheendSubHit
method indicates the end of a formatted subhit.boolean
getMoreSearches()
getMoreSearches
returns the state of theSearchContentHandler
with respect to further searches from its data source.void
setDatabaseID(String databaseID)
setDatabaseID
identifies the database searched by a name, ID or URN.void
setMoreSearches(boolean val)
setMoreSearches
sets the state of theSearchContentHandler
's expectation of receiving more results.void
setQueryID(String queryID)
setQueryID
identifies the query sequence by a name, ID or URN.void
startHeader()
ThestartHeader
method indicates the start of a formatted header.void
startHit()
ThestartHit
method indicates the start of a formatted hit.void
startSearch()
ThestartSearch
method indicates the start of useful search information.void
startSubHit()
ThestartSubHit
method indicates the start of a formatted subhit.
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Constructor Detail
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SearchContentFilter
public SearchContentFilter(SearchContentHandler delegate)
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Method Detail
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addHitProperty
public void addHitProperty(Object key, Object value)
Description copied from interface:SearchContentHandler
TheaddHitProperty
method adds a key/value pair containing some property of a particular hit.- Specified by:
addHitProperty
in interfaceSearchContentHandler
- Parameters:
key
- anObject
.value
- anObject
.
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addSearchProperty
public void addSearchProperty(Object key, Object value)
Description copied from interface:SearchContentHandler
TheaddSearchProperty
method adds a key/value pair containing some property of the overall search result.- Specified by:
addSearchProperty
in interfaceSearchContentHandler
- Parameters:
key
- anObject
.value
- anObject
.
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addSubHitProperty
public void addSubHitProperty(Object key, Object value)
Description copied from interface:SearchContentHandler
TheaddSubHitProperty
method adds a key/value pair containing some property of a particular subhit.- Specified by:
addSubHitProperty
in interfaceSearchContentHandler
- Parameters:
key
- anObject
.value
- anObject
.
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startHeader
public void startHeader()
Description copied from interface:SearchContentHandler
ThestartHeader
method indicates the start of a formatted header. This usually contains information relevant to the search as a whole.- Specified by:
startHeader
in interfaceSearchContentHandler
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endHeader
public void endHeader()
Description copied from interface:SearchContentHandler
TheendHeader
method indicates the end of a formatted header.- Specified by:
endHeader
in interfaceSearchContentHandler
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startHit
public void startHit()
Description copied from interface:SearchContentHandler
ThestartHit
method indicates the start of a formatted hit. This could be a single line, or a block of lines.- Specified by:
startHit
in interfaceSearchContentHandler
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endHit
public void endHit()
Description copied from interface:SearchContentHandler
TheendHit
method indicates the end of a formatted hit.- Specified by:
endHit
in interfaceSearchContentHandler
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startSearch
public void startSearch()
Description copied from interface:SearchContentHandler
ThestartSearch
method indicates the start of useful search information.- Specified by:
startSearch
in interfaceSearchContentHandler
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endSearch
public void endSearch()
Description copied from interface:SearchContentHandler
TheendSearch
method indicates the end of useful search information.- Specified by:
endSearch
in interfaceSearchContentHandler
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startSubHit
public void startSubHit()
Description copied from interface:SearchContentHandler
ThestartSubHit
method indicates the start of a formatted subhit. There may be zero or more of these per hit.- Specified by:
startSubHit
in interfaceSearchContentHandler
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endSubHit
public void endSubHit()
Description copied from interface:SearchContentHandler
TheendSubHit
method indicates the end of a formatted subhit.- Specified by:
endSubHit
in interfaceSearchContentHandler
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setQueryID
public void setQueryID(String queryID)
Description copied from interface:SearchContentHandler
setQueryID
identifies the query sequence by a name, ID or URN.- Specified by:
setQueryID
in interfaceSearchContentHandler
- Parameters:
queryID
- aString
which should be an unique identifer for the sequence.
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setDatabaseID
public void setDatabaseID(String databaseID)
Description copied from interface:SearchContentHandler
setDatabaseID
identifies the database searched by a name, ID or URN.- Specified by:
setDatabaseID
in interfaceSearchContentHandler
- Parameters:
databaseID
- aString
which should be an unique identifier for the database searched.
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getMoreSearches
public boolean getMoreSearches()
Description copied from interface:SearchContentHandler
getMoreSearches
returns the state of theSearchContentHandler
with respect to further searches from its data source. Used for handling streams of search results.- Specified by:
getMoreSearches
in interfaceSearchContentHandler
- Returns:
- a
boolean
value.
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setMoreSearches
public void setMoreSearches(boolean val)
Description copied from interface:SearchContentHandler
setMoreSearches
sets the state of theSearchContentHandler
's expectation of receiving more results. Used for handling streams of search results.- Specified by:
setMoreSearches
in interfaceSearchContentHandler
- Parameters:
val
- aboolean
value.
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