Uses of Interface
org.biojava.bio.search.BioMatcher

Packages that use BioMatcher

Package	Description
org.biojava.bio.search	Interfaces and classes for representing sequence similarity search results.

Uses of BioMatcher in org.biojava.bio.search

Classes in org.biojava.bio.search that implement BioMatcher

Modifier and Type	Class	Description
class	MaxMismatchMatcher	A BioMatcher class returned by MaxMismatchPattern.matcher() that implements searching of a SymbolList.

Methods in org.biojava.bio.search that return BioMatcher

Modifier and Type	Method	Description
BioMatcher	BioPattern.matcher(SymbolList symList)	Get a matcher that will use these parameters to search a SymbolList.
BioMatcher	MaxMismatchPattern.matcher(SymbolList symList)
BioMatcher	SeqContentPattern.matcher(SymbolList symList)