SequenceFactory (biojava-legacy 1.9.5 API)

All Known Implementing Classes:

SimpleSequenceFactory
```
public interface SequenceFactory
```
Deprecated.
use org.biojavax.bio.seq.io.RichSequenceBuilder or use org.biojavax.bio.seq.io.SequenceBuilder

The interface for objects that will manufacture sequences.
The factory layer is in here as sequences are potentialy heavy-weight, so we want to decouple their possibly complicated creation from the code that wants to make them.

Author:

Matthew Pocock

Method Summary

All Methods Instance Methods Abstract Methods Deprecated Methods
Modifier and Type	Method	Description
`Sequence`	`createSequence(SymbolList symList, String uri, String name, Annotation annotation)`	Deprecated. Creates a sequence using these parameters.

- Method Detail
  - createSequence
```
Sequence createSequence(SymbolList symList,
                        String uri,
                        String name,
                        Annotation annotation)
```
    Deprecated.
    
    Creates a sequence using these parameters.
    
    Parameters:
    
    symList - the SymbolList defining the 'sequence'
    
    uri - the uri of the sequence. This will be returned by the getURN() method on Sequence.
    
    name - the name
    
    annotation - a hint for the annotation of the resulting sequence
    
    Returns:
    
    a new Sequence object