Package org.biojava.bio.seq.db.emblcd

Class AcnumHitReader

java.lang.Object

org.biojava.bio.seq.db.emblcd.EmblCDROMIndexReader

org.biojava.bio.seq.db.emblcd.AcnumHitReader

public class AcnumHitReader
extends EmblCDROMIndexReader

AcnumHitReader reads the "acnum.hit" file of an EMBL CD-ROM format binary index.

Since:

1.2

Author:

Keith James

Field Summary

Fields inherited from class org.biojava.bio.seq.db.emblcd.EmblCDROMIndexReader

input, recParser, sb

Constructor Summary

Constructors

Constructor	Description
AcnumHitReader(InputStream input)	Creates a new AcnumHitReader.

Method Summary

Modifier and Type	Method	Description
Object[]	readRecord()	readRecord creates an array of Objects from the raw byte array of a single record.

Methods inherited from class org.biojava.bio.seq.db.emblcd.EmblCDROMIndexReader

close, readDBDate, readDBName, readDBRelease, readFileLength, readRawRecord, readRecordCount, readRecordLength

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AcnumHitReader

public AcnumHitReader(InputStream input)
               throws IOException

Creates a new AcnumHitReader.

Parameters:

input - an InputStream.

Throws:

IOException - if an error occurs.

Method Detail

readRecord

public Object[] readRecord()
                    throws IOException

readRecord creates an array of Objects from the raw byte array of a single record.

Specified by:

readRecord in class EmblCDROMIndexReader

Returns:

an Object [] array.

Throws:

IOException - if an error occurs.