Package org.biojava.bio.seq.distributed

Sequences and SequenceDBs which are composed from data taken from a number of data sources.

This package attempts to generalize the data aggregation facilities offered by DAS clients (e.g. the org.biojava.bio.program.das package), and generalize them, allowing data from non-DAS sources to be integrated.

NOTE: all APIs in this package are currently at an experimental stage, and may change from day to day!

Interface Summary

Interface	Description
DistDataSource	Object which contributes data to a DistributedSequenceDB.

Class Summary

Class	Description
DistributedSequenceDB	Sequence database from the meta-DAS system.
GFFDataSource	Use a GFFEntrySet as a DataSource for adding annotation to sequences.
SequenceDBDataSource	Turn an entire SequenceDB instance into a DistDataSource.