Uses of Interface
org.biojava.bio.symbol.AlphabetIndex

Packages that use AlphabetIndex

Package	Description
org.biojava.bio.dist	Probability distributions over Alphabets.
org.biojava.bio.symbol	Representation of the Symbols that make up a sequence, and locations within them.

Uses of AlphabetIndex in org.biojava.bio.dist

Constructors in org.biojava.bio.dist with parameters of type AlphabetIndex

Constructor	Description
IndexedCount(AlphabetIndex indexer)	Get a new InexedCount for an alphabet indexer.

Uses of AlphabetIndex in org.biojava.bio.symbol

Methods in org.biojava.bio.symbol that return AlphabetIndex

Modifier and Type	Method	Description
static AlphabetIndex	AlphabetManager.getAlphabetIndex(FiniteAlphabet alpha)	Get an indexer for a specified alphabet.
static AlphabetIndex	AlphabetManager.getAlphabetIndex(Symbol[] syms)	Get an indexer for an array of symbols.