Uses of Interface
org.biojavax.bio.db.BioEntryDBLite
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Packages that use BioEntryDBLite Package Description org.biojavax.bio.db Interactions between biojavax objects and a DB.org.biojavax.bio.db.biosql Interface between biojava and biosql databasesorg.biojavax.bio.db.ncbi Interfaces to NCBI data. -
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Uses of BioEntryDBLite in org.biojavax.bio.db
Subinterfaces of BioEntryDBLite in org.biojavax.bio.db Modifier and Type Interface Description interface
BioEntryDB
.interface
RichSequenceDB
A database of RichSequences with accessible keys and iterators over all sequences.interface
RichSequenceDBLite
A database of RichSequences.Classes in org.biojavax.bio.db that implement BioEntryDBLite Modifier and Type Class Description class
AbstractBioEntryDB
An abstract implementation of BioEntryDB that provides the getBioEntryIterator method.class
AbstractRichSequenceDB
An abstract implementation of RichSequenceDB that provides the getRichSequenceIterator method.class
HashBioEntryDB
An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects.class
HashRichSequenceDB
An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects. -
Uses of BioEntryDBLite in org.biojavax.bio.db.biosql
Classes in org.biojavax.bio.db.biosql that implement BioEntryDBLite Modifier and Type Class Description class
BioSQLBioEntryDB
class
BioSQLRichSequenceDB
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Uses of BioEntryDBLite in org.biojavax.bio.db.ncbi
Classes in org.biojavax.bio.db.ncbi that implement BioEntryDBLite Modifier and Type Class Description class
GenbankRichSequenceDB
This class contains functions accessing DNA sequences in Genbank format.class
GenpeptRichSequenceDB
This class contains functions accessing Peptide sequences in Genpept format.
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