001/*
002 *                    BioJava development code
003 *
004 * This code may be freely distributed and modified under the
005 * terms of the GNU Lesser General Public Licence.  This should
006 * be distributed with the code.  If you do not have a copy,
007 * see:
008 *
009 *      http://www.gnu.org/copyleft/lesser.html
010 *
011 * Copyright for this code is held jointly by the individual
012 * authors.  These should be listed in @author doc comments.
013 *
014 * For more information on the BioJava project and its aims,
015 * or to join the biojava-l mailing list, visit the home page
016 * at:
017 *
018 *      http://www.biojava.org/
019 *
020 */
021package org.biojava.nbio.core.search.io.blast;
022
023import org.biojava.nbio.core.search.io.Hit;
024import org.biojava.nbio.core.search.io.Result;
025import java.util.HashMap;
026import java.util.List;
027import org.biojava.nbio.core.sequence.template.Sequence;
028
029/**
030 * This class models a Blast/Blast plus result.
031 * You will find one of this for every query sequence specified in the run.
032 *
033 * Designed by Paolo Pavan.
034 * You may want to find my contacts on Github and LinkedIn for code info
035 * or discuss major changes.
036 * https://github.com/paolopavan
037 *
038 * @author Paolo Pavan
039 *
040 */
041public class BlastResult extends Result{
042        public BlastResult(String program, String version, String reference, String dbFile, HashMap<String, String> programSpecificParameters, int iterationNumber, String queryID, String queryDef, int queryLength, List<Hit> hits, Sequence querySequence) {
043                super(program, version, reference, dbFile, programSpecificParameters, iterationNumber, queryID, queryDef, queryLength, hits, querySequence);
044        }
045
046}
047
048
049