001/*
002 *                    BioJava development code
003 *
004 * This code may be freely distributed and modified under the
005 * terms of the GNU Lesser General Public Licence.  This should
006 * be distributed with the code.  If you do not have a copy,
007 * see:
008 *
009 *      http://www.gnu.org/copyleft/lesser.html
010 *
011 * Copyright for this code is held jointly by the individual
012 * authors.  These should be listed in @author doc comments.
013 *
014 * For more information on the BioJava project and its aims,
015 * or to join the biojava-l mailing list, visit the home page
016 * at:
017 *
018 *      http://www.biojava.org/
019 *
020 */
021package org.biojava.nbio.phylo;
022
023/**
024 * The TreeConstructorType specifies the aligorithm used to construct the tree
025 * (clustering algorithm). Only support for the NJ algorithm (from forester) is
026 * currently implemented.
027 *
028 * @author Aleix Lafita
029 * @since 4.1.1
030 *
031 */
032public enum TreeConstructorType {
033
034        /** Neighbor Joining Algorithm */
035        NJ,
036
037        /** Unweighted Pair-Group Method with Arithmetic mean */
038        UPGMA,
039
040        /** What does this stand for? (Aleix: Nov 2015) */
041        AV;
042}