Uses of Class
org.biojava.nbio.core.search.io.blast.BlastHspBuilder
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Packages that use BlastHspBuilder Package Description org.biojava.nbio.core.search.io.blast -
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Uses of BlastHspBuilder in org.biojava.nbio.core.search.io.blast
Methods in org.biojava.nbio.core.search.io.blast that return BlastHspBuilder Modifier and Type Method Description BlastHspBuilder
BlastHspBuilder. setHspAlignLen(int hspAlignLen)
BlastHspBuilder
BlastHspBuilder. setHspBitScore(double hspBitScore)
BlastHspBuilder
BlastHspBuilder. setHspEvalue(double hspEvalue)
BlastHspBuilder
BlastHspBuilder. setHspGaps(int hspGaps)
BlastHspBuilder
BlastHspBuilder. setHspHitFrame(int hspHitFrame)
BlastHspBuilder
BlastHspBuilder. setHspHitFrom(int hspHitFrom)
BlastHspBuilder
BlastHspBuilder. setHspHitTo(int hspHitTo)
BlastHspBuilder
BlastHspBuilder. setHspHseq(String hspHseq)
BlastHspBuilder
BlastHspBuilder. setHspIdentity(int hspIdentity)
BlastHspBuilder
BlastHspBuilder. setHspIdentityString(String hspIdentityString)
BlastHspBuilder
BlastHspBuilder. setHspNum(int hspNum)
BlastHspBuilder
BlastHspBuilder. setHspPositive(int hspPositive)
BlastHspBuilder
BlastHspBuilder. setHspQseq(String hspQseq)
BlastHspBuilder
BlastHspBuilder. setHspQueryFrame(int hspQueryFrame)
BlastHspBuilder
BlastHspBuilder. setHspQueryFrom(int hspQueryFrom)
BlastHspBuilder
BlastHspBuilder. setHspQueryTo(int hspQueryTo)
BlastHspBuilder
BlastHspBuilder. setHspScore(int hspScore)
BlastHspBuilder
BlastHspBuilder. setMismatchCount(Integer mismatchCount)
BlastHspBuilder
BlastHspBuilder. setPercentageIdentity(Double percentageIdentity)
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