Class Hierarchy
- java.lang.Object
- org.biojava.nbio.core.sequence.template.AbstractSequence<C> (implements org.biojava.nbio.core.sequence.template.Sequence<C>)
- org.biojava.nbio.core.sequence.BasicSequence<C>
- org.biojava.nbio.core.sequence.DNASequence
- org.biojava.nbio.core.sequence.CDSSequence
- org.biojava.nbio.core.sequence.ChromosomeSequence
- org.biojava.nbio.core.sequence.ExonSequence
- org.biojava.nbio.core.sequence.GeneSequence
- org.biojava.nbio.core.sequence.IntronSequence
- org.biojava.nbio.core.sequence.StartCodonSequence
- org.biojava.nbio.core.sequence.StopCodonSequence
- org.biojava.nbio.core.sequence.TranscriptSequence
- org.biojava.nbio.core.sequence.ProteinSequence
- org.biojava.nbio.core.sequence.RNASequence
- org.biojava.nbio.core.sequence.AccessionID
- org.biojava.nbio.core.sequence.CDSComparator (implements java.util.Comparator<T>, java.io.Serializable)
- org.biojava.nbio.core.sequence.ExonComparator (implements java.util.Comparator<T>, java.io.Serializable)
- org.biojava.nbio.core.sequence.MultipleSequenceAlignment<S,C> (implements org.biojava.nbio.core.sequence.template.LightweightProfile<S,C>)
- org.biojava.nbio.core.sequence.SequenceComparator (implements java.util.Comparator<T>, java.io.Serializable)
- org.biojava.nbio.core.sequence.SequenceOptimizationHints
- org.biojava.nbio.core.sequence.TaxonomyID
- org.biojava.nbio.core.sequence.template.AbstractSequence<C> (implements org.biojava.nbio.core.sequence.template.Sequence<C>)
Enum Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
- org.biojava.nbio.core.sequence.DataSource
- org.biojava.nbio.core.sequence.DNASequence.DNAType
- org.biojava.nbio.core.sequence.SequenceOptimizationHints.SequenceCollection
- org.biojava.nbio.core.sequence.SequenceOptimizationHints.SequenceUsage
- org.biojava.nbio.core.sequence.Strand
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)