Class CytobandParser
- java.lang.Object
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- org.biojava.nbio.genome.parsers.cytoband.CytobandParser
 
 
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public class CytobandParser extends Object
Parses the cytoband (karyotype) file from UCSC. 
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Field Summary
Fields Modifier and Type Field Description static StringDEFAULT_LOCATION 
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Constructor Summary
Constructors Constructor Description CytobandParser() 
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description SortedSet<Cytoband>getAllCytobands(InputStream instream)SortedSet<Cytoband>getAllCytobands(URL u)static voidmain(String[] args) 
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Field Detail
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DEFAULT_LOCATION
public static final String DEFAULT_LOCATION
- See Also:
 - Constant Field Values
 
 
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Constructor Detail
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CytobandParser
public CytobandParser()
 
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Method Detail
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getAllCytobands
public SortedSet<Cytoband> getAllCytobands(URL u) throws IOException
- Throws:
 IOException
 
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getAllCytobands
public SortedSet<Cytoband> getAllCytobands(InputStream instream) throws IOException
- Throws:
 IOException
 
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