Uses of Class
org.biojava.nbio.genome.parsers.genename.ChromPos

Packages that use ChromPos

Package	Description
org.biojava.nbio.genome.util

Uses of ChromPos in org.biojava.nbio.genome.util

Methods in org.biojava.nbio.genome.util that return ChromPos

Modifier and Type	Method	Description
static ChromPos	ChromosomeMappingTools.getChromosomePosForCDScoordinate(int cdsNucleotidePosition, GeneChromosomePosition chromPos)	Maps the position of a CDS nucleotide back to the genome
static ChromPos	ChromosomeMappingTools.getChromPosForward(int cdsPos, List<Integer> exonStarts, List<Integer> exonEnds, int cdsStart, int cdsEnd)	Get the CDS position mapped onto the chromosome position
static ChromPos	ChromosomeMappingTools.getChromPosReverse(int cdsPos, List<Integer> exonStarts, List<Integer> exonEnds, int cdsStart, int cdsEnd)	Get the CDS position mapped on the chromosome position