Package org.biojava.nbio.structure.align
Class ClusterAltAligs
- java.lang.Object
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- org.biojava.nbio.structure.align.ClusterAltAligs
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public class ClusterAltAligs extends Object
A class that clusters alternative alignments according to their similarity.- Since:
- 1.5
- Version:
- %I% %G%
- Author:
- Andreas Prlic
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Field Summary
Fields Modifier and Type Field Description static int
DEFAULT_CLUSTER_CUTOFF
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Constructor Summary
Constructors Constructor Description ClusterAltAligs()
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static void
cluster(AlternativeAlignment[] aligs)
static void
cluster(AlternativeAlignment[] aligs, int cutoff)
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Field Detail
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DEFAULT_CLUSTER_CUTOFF
public static final int DEFAULT_CLUSTER_CUTOFF
- See Also:
- Constant Field Values
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Constructor Detail
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ClusterAltAligs
public ClusterAltAligs()
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Method Detail
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cluster
public static void cluster(AlternativeAlignment[] aligs)
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cluster
public static void cluster(AlternativeAlignment[] aligs, int cutoff)
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