FarmJob (biojava 5.2.0 API)

java.lang.Object
- org.biojava.nbio.structure.align.FarmJob

All Implemented Interfaces:

Runnable
```
public class FarmJob
extends Object
implements Runnable
```
A job as it can be run on the farm.

Author:

Andreas Prlic for arguments see the printHelp() method.

Constructor Summary

Constructors
Constructor Description

FarmJob()

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`addAlignmentProgressListener(AlignmentProgressListener listener)`
`void`	`clearListeners()`
`FarmJobParameters`	`getParams()`
`static void`	`main(String[] argv)`
`void`	`printHelp()`
`void`	`run()`
`void`	`setParams(FarmJobParameters params)`
`void`	`terminate()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- FarmJob
```
public FarmJob()
```

Method Detail

getParams
```
public FarmJobParameters getParams()
```

setParams

public void setParams(FarmJobParameters params)

addAlignmentProgressListener

public void addAlignmentProgressListener(AlignmentProgressListener listener)

clearListeners
```
public void clearListeners()
```

main

public static void main(String[] argv)

run
```
public void run()
```
Specified by:

run in interface Runnable

terminate
```
public void terminate()
```

printHelp
```
public void printHelp()
```