Class OptimalCECPMain

  • All Implemented Interfaces:
    StructureAlignment

    public class OptimalCECPMain
    extends CeMain
    A wrapper for CeMain which sets default parameters to be appropriate for finding circular permutations.

    A circular permutation consists of a single cleavage point and rearrangement between two structures, for example:

     ABCDEFG
     DEFGABC
     
    Author:
    Spencer Bliven.