Package org.biojava.nbio.structure.align.fatcat
Classes related to the implementation of the FATCAT alignment algorithm, here called jFATCAT.
FATCAT reference:
Yuzhen Ye & Adam Godzik (2003) Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics vol.19 suppl. 2. ii246-ii255.see also:
Andreas Prlic; Spencer Bliven; Peter W. Rose; Wolfgang F. Bluhm; Chris Bizon; Adam Godzik; Philip E. Bourne (2010) Pre-calculated protein structure alignments at the RCSB PDB website Bioinformatics 26: 2983-2985
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Class Summary Class Description FatCat FatCatFlexible FatCatRigid FatCatUserArgumentProcessor