Interface Summary Interface Description DomainProviderDecomposes a structure from the PDB into representative domains PDPProviderDecomposes a structure into representative PDP domains.
Class Summary Class Description AssignmentXMLSerializer DomainProviderFactoryA simple factory object that returns the system wide default DomainProvider LocalProteinDomainParserProtein Domain Parser is a an algorithm that attempts at assigning domains for 3D protein structures. PDBDomainProviderClass to fetch domains through the RCSB's REST API. PDPDomain RemoteDomainProviderA DomainProvider that uses a mixture of SCOP and PDP domains. RemotePDPProviderA class that provided PDP assignments that are loaded from a remote web server SerializableCache<K,V>A class that provides all that is necessary to create a Serializable Cache