Input and Output of mmcif files. See also the BioJava 3 tutorial for more information on mmCif parsing.
Interface Summary Interface Description ChemCompProviderInterface that is implemented by all classes that can provide
MMcifConsumerAn interface for the events triggered by a MMcifParser. MMcifParserInterface that needs to be implemented by an MMcifParser
Class Summary Class Description AllChemCompProviderA ChemComp provider that downloads and caches the components.cif file from the wwPDB site. ChemCompConsumer ChemCompGroupFactory ChemicalComponentDictionaryA representation of the Chemical Component Dictionary. DownloadChemCompProviderThis provider of chemical components can download and cache chemical component definition files from the RCSB PDB web site. MetalBondConsumerCreated by andreas on 6/9/16. MetalBondParserCreated by andreas on 6/6/16. MMCIFFileToolsSome tools for mmCIF file writing. ReducedChemCompProvider SimpleMMcifConsumerA MMcifConsumer implementation that builds an in-memory representation of the content of a mmcif file as a BioJava Structure object. SimpleMMcifParserA simple mmCif file parser Usage: ZipChemCompProviderThis chemical component provider retrieves and caches chemical component definition files from a zip archive specified in its construction.