Class SiftsMappingProvider
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- org.biojava.nbio.structure.io.sifts.SiftsMappingProvider
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public class SiftsMappingProvider extends Object
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Constructor Summary
Constructors Constructor Description SiftsMappingProvider()
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static List<SiftsEntity>
getSiftsMapping(String pdbId)
Return the SIFTS mappings by getting the info from individual SIFTS xml files at URL "http://ftp.ebi.ac.uk/pub/databases/msd/sifts/xml/%s.xml.gz"static void
setFileLocation(String myFileLocation)
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Constructor Detail
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SiftsMappingProvider
public SiftsMappingProvider()
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Method Detail
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setFileLocation
public static void setFileLocation(String myFileLocation)
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getSiftsMapping
public static List<SiftsEntity> getSiftsMapping(String pdbId) throws IOException
Return the SIFTS mappings by getting the info from individual SIFTS xml files at URL "http://ftp.ebi.ac.uk/pub/databases/msd/sifts/xml/%s.xml.gz"- Parameters:
pdbId
- the pdb identifier- Returns:
- Throws:
IOException
- if problems downloading or parsing the file
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