BioAssemblyInfo (biojava 5.2.0 API)

java.lang.Object
- org.biojava.nbio.structure.quaternary.BioAssemblyInfo

All Implemented Interfaces:

Serializable
```
public class BioAssemblyInfo
extends Object
implements Serializable
```
Representation of a Biological Assembly annotation as provided by the PDB. Contains all the information required to build the Biological Assembly from the asymmetric unit. Note that the PDB allows for 1 or more Biological Assemblies for a given entry. They are identified by the id field.

Author:

Jose Duarte

See Also:

Serialized Form

Constructor Summary

Constructors
Constructor Description

BioAssemblyInfo()
Empty constructor

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`int`	`getId()`	The identifier for this Biological Assembly, from 1 to n
`int`	`getMacromolecularSize()`	Returns the macromolecular size of this biological assembly, i.e.
`List<BiologicalAssemblyTransformation>`	`getTransforms()`	Return the list of `BiologicalAssemblyTransformation`s needed to generate the biological assembly.
`void`	`setId(int id)`
`void`	`setMacromolecularSize(int macromolecularSize)`
`void`	`setTransforms(List<BiologicalAssemblyTransformation> transforms)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - BioAssemblyInfo
```
public BioAssemblyInfo()
```
    Empty constructor
- Method Detail
  - getId
```
public int getId()
```
    The identifier for this Biological Assembly, from 1 to n
    
    Returns:
  - setId
```
public void setId(int id)
```
  - getTransforms
```
public List<BiologicalAssemblyTransformation> getTransforms()
```
    Return the list of BiologicalAssemblyTransformations needed to generate the biological assembly. There is one transformation per internal chain id.
    
    Returns:
  - setTransforms
```
public void setTransforms(List<BiologicalAssemblyTransformation> transforms)
```
  - getMacromolecularSize
```
public int getMacromolecularSize()
```
    Returns the macromolecular size of this biological assembly, i.e. the number of polymeric chains (protein or nucleotide chains, not sugars) in the biological assembly.
    
    Returns:
  - setMacromolecularSize
```
public void setMacromolecularSize(int macromolecularSize)
```
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object