Class BlastClustReader
- java.lang.Object
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- org.biojava.nbio.structure.symmetry.utils.BlastClustReader
 
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- All Implemented Interfaces:
- Serializable
 
 public class BlastClustReader extends Object implements Serializable - See Also:
- Serialized Form
 
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Constructor SummaryConstructors Constructor Description BlastClustReader(int sequenceIdentity)
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Method SummaryAll Methods Instance Methods Concrete Methods Modifier and Type Method Description List<List<String>>getChainIdsInEntry(String pdbId)List<List<String>>getPdbChainIdClusters()List<List<String>>getPdbChainIdClusters(String pdbId)StringgetRepresentativeChain(String pdbId, String chainId)Map<String,String>getRepresentatives(String pdbId)intindexOf(String pdbId, String chainId)
 
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Constructor Detail- 
BlastClustReaderpublic BlastClustReader(int sequenceIdentity) 
 
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Method Detail- 
getPdbChainIdClusterspublic List<List<String>> getPdbChainIdClusters() 
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getRepresentativespublic Map<String,String> getRepresentatives(String pdbId) 
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getRepresentativeChainpublic String getRepresentativeChain(String pdbId, String chainId) 
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getPdbChainIdClusterspublic List<List<String>> getPdbChainIdClusters(String pdbId) 
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getChainIdsInEntrypublic List<List<String>> getChainIdsInEntry(String pdbId) 
 
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