Class ModelledSubgroup
- java.lang.Object
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- org.biojava.nbio.structure.validation.ModelledSubgroup
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public class ModelledSubgroup extends Object
Java class for anonymous complex type.
The following schema fragment specifies the expected content contained within this class.
<complexType> <complexContent> <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> <sequence> <element ref="{}angle-outlier" maxOccurs="unbounded" minOccurs="0"/> <element ref="{}clash" maxOccurs="unbounded" minOccurs="0"/> <element ref="{}bond-outlier" maxOccurs="unbounded" minOccurs="0"/> <element ref="{}mog-angle-outlier" maxOccurs="unbounded" minOccurs="0"/> <choice> <element ref="{}symm-clash" maxOccurs="unbounded" minOccurs="0"/> <element ref="{}mog-bond-outlier" maxOccurs="unbounded" minOccurs="0"/> </choice> </sequence> <attribute name="NatomsEDS" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" /> <attribute name="altcode" use="required" type="{http://www.w3.org/2001/XMLSchema}anySimpleType" /> <attribute name="avgoccu" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="chain" use="required" type="{http://www.w3.org/2001/XMLSchema}NCName" /> <attribute name="ent" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" /> <attribute name="flippable-sidechain" type="{http://www.w3.org/2001/XMLSchema}integer" /> <attribute name="icode" use="required" type="{http://www.w3.org/2001/XMLSchema}anySimpleType" /> <attribute name="ligRSRZ" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="ligRSRnbrMean" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="ligRSRnbrStdev" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="ligRSRnumnbrs" type="{http://www.w3.org/2001/XMLSchema}integer" /> <attribute name="model" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" /> <attribute name="mogul-ignore" type="{http://www.w3.org/2001/XMLSchema}NCName" /> <attribute name="num-H-reduce" type="{http://www.w3.org/2001/XMLSchema}integer" /> <attribute name="owab" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="phi" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="psi" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="rama" type="{http://www.w3.org/2001/XMLSchema}NCName" /> <attribute name="resname" use="required" type="{http://www.w3.org/2001/XMLSchema}NCName" /> <attribute name="resnum" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" /> <attribute name="rota" type="{http://www.w3.org/2001/XMLSchema}anySimpleType" /> <attribute name="rscc" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="rsr" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="rsrz" type="{http://www.w3.org/2001/XMLSchema}decimal" /> <attribute name="said" use="required" type="{http://www.w3.org/2001/XMLSchema}NCName" /> <attribute name="seq" use="required" type="{http://www.w3.org/2001/XMLSchema}NMTOKEN" /> </restriction> </complexContent> </complexType>
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Field Summary
Fields Modifier and Type Field Description protected String
altcode
protected List<AngleOutlier>
angleOutlier
protected BigDecimal
avgoccu
protected List<BondOutlier>
bondOutlier
protected String
chain
protected List<Clash>
clash
protected BigInteger
ent
protected BigInteger
flippableSidechain
protected String
icode
protected BigDecimal
ligRSRnbrMean
protected BigDecimal
ligRSRnbrStdev
protected BigInteger
ligRSRnumnbrs
protected BigDecimal
ligRSRZ
protected BigInteger
model
protected List<MogAngleOutlier>
mogAngleOutlier
protected List<MogBondOutlier>
mogBondOutlier
protected String
mogulIgnore
protected BigInteger
natomsEDS
protected BigInteger
numHReduce
protected BigDecimal
owab
protected BigDecimal
phi
protected BigDecimal
psi
protected String
rama
protected String
resname
protected BigInteger
resnum
protected String
rota
protected BigDecimal
rscc
protected BigDecimal
rsr
protected BigDecimal
rsrz
protected String
said
protected String
seq
protected List<SymmClash>
symmClash
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Constructor Summary
Constructors Constructor Description ModelledSubgroup()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description String
getAltcode()
Gets the value of the altcode property.List<AngleOutlier>
getAngleOutlier()
Gets the value of the angleOutlier property.BigDecimal
getAvgoccu()
Gets the value of the avgoccu property.List<BondOutlier>
getBondOutlier()
Gets the value of the bondOutlier property.String
getChain()
Gets the value of the chain property.List<Clash>
getClash()
Gets the value of the clash property.BigInteger
getEnt()
Gets the value of the ent property.BigInteger
getFlippableSidechain()
Gets the value of the flippableSidechain property.String
getIcode()
Gets the value of the icode property.BigDecimal
getLigRSRnbrMean()
Gets the value of the ligRSRnbrMean property.BigDecimal
getLigRSRnbrStdev()
Gets the value of the ligRSRnbrStdev property.BigInteger
getLigRSRnumnbrs()
Gets the value of the ligRSRnumnbrs property.BigDecimal
getLigRSRZ()
Gets the value of the ligRSRZ property.BigInteger
getModel()
Gets the value of the model property.List<MogAngleOutlier>
getMogAngleOutlier()
Gets the value of the mogAngleOutlier property.List<MogBondOutlier>
getMogBondOutlier()
Gets the value of the mogBondOutlier property.String
getMogulIgnore()
Gets the value of the mogulIgnore property.BigInteger
getNatomsEDS()
Gets the value of the natomsEDS property.BigInteger
getNumHReduce()
Gets the value of the numHReduce property.BigDecimal
getOwab()
Gets the value of the owab property.BigDecimal
getPhi()
Gets the value of the phi property.BigDecimal
getPsi()
Gets the value of the psi property.String
getRama()
Gets the value of the rama property.String
getResname()
Gets the value of the resname property.BigInteger
getResnum()
Gets the value of the resnum property.String
getRota()
Gets the value of the rota property.BigDecimal
getRscc()
Gets the value of the rscc property.BigDecimal
getRsr()
Gets the value of the rsr property.BigDecimal
getRsrz()
Gets the value of the rsrz property.String
getSaid()
Gets the value of the said property.String
getSeq()
Gets the value of the seq property.List<SymmClash>
getSymmClash()
Gets the value of the symmClash property.void
setAltcode(String value)
Sets the value of the altcode property.void
setAvgoccu(BigDecimal value)
Sets the value of the avgoccu property.void
setChain(String value)
Sets the value of the chain property.void
setEnt(BigInteger value)
Sets the value of the ent property.void
setFlippableSidechain(BigInteger value)
Sets the value of the flippableSidechain property.void
setIcode(String value)
Sets the value of the icode property.void
setLigRSRnbrMean(BigDecimal value)
Sets the value of the ligRSRnbrMean property.void
setLigRSRnbrStdev(BigDecimal value)
Sets the value of the ligRSRnbrStdev property.void
setLigRSRnumnbrs(BigInteger value)
Sets the value of the ligRSRnumnbrs property.void
setLigRSRZ(BigDecimal value)
Sets the value of the ligRSRZ property.void
setModel(BigInteger value)
Sets the value of the model property.void
setMogulIgnore(String value)
Sets the value of the mogulIgnore property.void
setNatomsEDS(BigInteger value)
Sets the value of the natomsEDS property.void
setNumHReduce(BigInteger value)
Sets the value of the numHReduce property.void
setOwab(BigDecimal value)
Sets the value of the owab property.void
setPhi(BigDecimal value)
Sets the value of the phi property.void
setPsi(BigDecimal value)
Sets the value of the psi property.void
setRama(String value)
Sets the value of the rama property.void
setResname(String value)
Sets the value of the resname property.void
setResnum(BigInteger value)
Sets the value of the resnum property.void
setRota(String value)
Sets the value of the rota property.void
setRscc(BigDecimal value)
Sets the value of the rscc property.void
setRsr(BigDecimal value)
Sets the value of the rsr property.void
setRsrz(BigDecimal value)
Sets the value of the rsrz property.void
setSaid(String value)
Sets the value of the said property.void
setSeq(String value)
Sets the value of the seq property.
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Field Detail
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angleOutlier
protected List<AngleOutlier> angleOutlier
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bondOutlier
protected List<BondOutlier> bondOutlier
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mogAngleOutlier
protected List<MogAngleOutlier> mogAngleOutlier
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mogBondOutlier
protected List<MogBondOutlier> mogBondOutlier
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natomsEDS
protected BigInteger natomsEDS
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avgoccu
protected BigDecimal avgoccu
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ent
protected BigInteger ent
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flippableSidechain
protected BigInteger flippableSidechain
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ligRSRZ
protected BigDecimal ligRSRZ
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ligRSRnbrMean
protected BigDecimal ligRSRnbrMean
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ligRSRnbrStdev
protected BigDecimal ligRSRnbrStdev
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ligRSRnumnbrs
protected BigInteger ligRSRnumnbrs
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model
protected BigInteger model
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mogulIgnore
protected String mogulIgnore
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numHReduce
protected BigInteger numHReduce
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owab
protected BigDecimal owab
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phi
protected BigDecimal phi
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psi
protected BigDecimal psi
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resnum
protected BigInteger resnum
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rscc
protected BigDecimal rscc
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rsr
protected BigDecimal rsr
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rsrz
protected BigDecimal rsrz
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Constructor Detail
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ModelledSubgroup
public ModelledSubgroup()
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Method Detail
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getAngleOutlier
public List<AngleOutlier> getAngleOutlier()
Gets the value of the angleOutlier property.This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a
set
method for the angleOutlier property.For example, to add a new item, do as follows:
getAngleOutlier().add(newItem);
Objects of the following type(s) are allowed in the list
AngleOutlier
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getClash
public List<Clash> getClash()
Gets the value of the clash property.This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a
set
method for the clash property.For example, to add a new item, do as follows:
getClash().add(newItem);
Objects of the following type(s) are allowed in the list
Clash
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getBondOutlier
public List<BondOutlier> getBondOutlier()
Gets the value of the bondOutlier property.This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a
set
method for the bondOutlier property.For example, to add a new item, do as follows:
getBondOutlier().add(newItem);
Objects of the following type(s) are allowed in the list
BondOutlier
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getMogAngleOutlier
public List<MogAngleOutlier> getMogAngleOutlier()
Gets the value of the mogAngleOutlier property.This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a
set
method for the mogAngleOutlier property.For example, to add a new item, do as follows:
getMogAngleOutlier().add(newItem);
Objects of the following type(s) are allowed in the list
MogAngleOutlier
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getSymmClash
public List<SymmClash> getSymmClash()
Gets the value of the symmClash property.This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a
set
method for the symmClash property.For example, to add a new item, do as follows:
getSymmClash().add(newItem);
Objects of the following type(s) are allowed in the list
SymmClash
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getMogBondOutlier
public List<MogBondOutlier> getMogBondOutlier()
Gets the value of the mogBondOutlier property.This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a
set
method for the mogBondOutlier property.For example, to add a new item, do as follows:
getMogBondOutlier().add(newItem);
Objects of the following type(s) are allowed in the list
MogBondOutlier
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getNatomsEDS
public BigInteger getNatomsEDS()
Gets the value of the natomsEDS property.- Returns:
- possible object is
BigInteger
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setNatomsEDS
public void setNatomsEDS(BigInteger value)
Sets the value of the natomsEDS property.- Parameters:
value
- allowed object isBigInteger
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getAltcode
public String getAltcode()
Gets the value of the altcode property.- Returns:
- possible object is
String
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setAltcode
public void setAltcode(String value)
Sets the value of the altcode property.- Parameters:
value
- allowed object isString
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getAvgoccu
public BigDecimal getAvgoccu()
Gets the value of the avgoccu property.- Returns:
- possible object is
BigDecimal
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setAvgoccu
public void setAvgoccu(BigDecimal value)
Sets the value of the avgoccu property.- Parameters:
value
- allowed object isBigDecimal
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getChain
public String getChain()
Gets the value of the chain property.- Returns:
- possible object is
String
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setChain
public void setChain(String value)
Sets the value of the chain property.- Parameters:
value
- allowed object isString
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getEnt
public BigInteger getEnt()
Gets the value of the ent property.- Returns:
- possible object is
BigInteger
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setEnt
public void setEnt(BigInteger value)
Sets the value of the ent property.- Parameters:
value
- allowed object isBigInteger
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getFlippableSidechain
public BigInteger getFlippableSidechain()
Gets the value of the flippableSidechain property.- Returns:
- possible object is
BigInteger
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setFlippableSidechain
public void setFlippableSidechain(BigInteger value)
Sets the value of the flippableSidechain property.- Parameters:
value
- allowed object isBigInteger
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getIcode
public String getIcode()
Gets the value of the icode property.- Returns:
- possible object is
String
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setIcode
public void setIcode(String value)
Sets the value of the icode property.- Parameters:
value
- allowed object isString
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getLigRSRZ
public BigDecimal getLigRSRZ()
Gets the value of the ligRSRZ property.- Returns:
- possible object is
BigDecimal
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setLigRSRZ
public void setLigRSRZ(BigDecimal value)
Sets the value of the ligRSRZ property.- Parameters:
value
- allowed object isBigDecimal
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getLigRSRnbrMean
public BigDecimal getLigRSRnbrMean()
Gets the value of the ligRSRnbrMean property.- Returns:
- possible object is
BigDecimal
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setLigRSRnbrMean
public void setLigRSRnbrMean(BigDecimal value)
Sets the value of the ligRSRnbrMean property.- Parameters:
value
- allowed object isBigDecimal
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getLigRSRnbrStdev
public BigDecimal getLigRSRnbrStdev()
Gets the value of the ligRSRnbrStdev property.- Returns:
- possible object is
BigDecimal
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setLigRSRnbrStdev
public void setLigRSRnbrStdev(BigDecimal value)
Sets the value of the ligRSRnbrStdev property.- Parameters:
value
- allowed object isBigDecimal
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getLigRSRnumnbrs
public BigInteger getLigRSRnumnbrs()
Gets the value of the ligRSRnumnbrs property.- Returns:
- possible object is
BigInteger
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setLigRSRnumnbrs
public void setLigRSRnumnbrs(BigInteger value)
Sets the value of the ligRSRnumnbrs property.- Parameters:
value
- allowed object isBigInteger
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getModel
public BigInteger getModel()
Gets the value of the model property.- Returns:
- possible object is
BigInteger
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setModel
public void setModel(BigInteger value)
Sets the value of the model property.- Parameters:
value
- allowed object isBigInteger
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getMogulIgnore
public String getMogulIgnore()
Gets the value of the mogulIgnore property.- Returns:
- possible object is
String
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setMogulIgnore
public void setMogulIgnore(String value)
Sets the value of the mogulIgnore property.- Parameters:
value
- allowed object isString
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getNumHReduce
public BigInteger getNumHReduce()
Gets the value of the numHReduce property.- Returns:
- possible object is
BigInteger
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setNumHReduce
public void setNumHReduce(BigInteger value)
Sets the value of the numHReduce property.- Parameters:
value
- allowed object isBigInteger
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getOwab
public BigDecimal getOwab()
Gets the value of the owab property.- Returns:
- possible object is
BigDecimal
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setOwab
public void setOwab(BigDecimal value)
Sets the value of the owab property.- Parameters:
value
- allowed object isBigDecimal
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getPhi
public BigDecimal getPhi()
Gets the value of the phi property.- Returns:
- possible object is
BigDecimal
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setPhi
public void setPhi(BigDecimal value)
Sets the value of the phi property.- Parameters:
value
- allowed object isBigDecimal
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getPsi
public BigDecimal getPsi()
Gets the value of the psi property.- Returns:
- possible object is
BigDecimal
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setPsi
public void setPsi(BigDecimal value)
Sets the value of the psi property.- Parameters:
value
- allowed object isBigDecimal
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getRama
public String getRama()
Gets the value of the rama property.- Returns:
- possible object is
String
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setRama
public void setRama(String value)
Sets the value of the rama property.- Parameters:
value
- allowed object isString
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getResname
public String getResname()
Gets the value of the resname property.- Returns:
- possible object is
String
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setResname
public void setResname(String value)
Sets the value of the resname property.- Parameters:
value
- allowed object isString
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getResnum
public BigInteger getResnum()
Gets the value of the resnum property.- Returns:
- possible object is
BigInteger
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setResnum
public void setResnum(BigInteger value)
Sets the value of the resnum property.- Parameters:
value
- allowed object isBigInteger
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getRota
public String getRota()
Gets the value of the rota property.- Returns:
- possible object is
String
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setRota
public void setRota(String value)
Sets the value of the rota property.- Parameters:
value
- allowed object isString
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getRscc
public BigDecimal getRscc()
Gets the value of the rscc property.- Returns:
- possible object is
BigDecimal
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setRscc
public void setRscc(BigDecimal value)
Sets the value of the rscc property.- Parameters:
value
- allowed object isBigDecimal
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getRsr
public BigDecimal getRsr()
Gets the value of the rsr property.- Returns:
- possible object is
BigDecimal
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setRsr
public void setRsr(BigDecimal value)
Sets the value of the rsr property.- Parameters:
value
- allowed object isBigDecimal
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getRsrz
public BigDecimal getRsrz()
Gets the value of the rsrz property.- Returns:
- possible object is
BigDecimal
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setRsrz
public void setRsrz(BigDecimal value)
Sets the value of the rsrz property.- Parameters:
value
- allowed object isBigDecimal
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getSaid
public String getSaid()
Gets the value of the said property.- Returns:
- possible object is
String
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setSaid
public void setSaid(String value)
Sets the value of the said property.- Parameters:
value
- allowed object isString
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getSeq
public String getSeq()
Gets the value of the seq property.- Returns:
- possible object is
String
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