001/* 002 * BioJava development code 003 * 004 * This code may be freely distributed and modified under the 005 * terms of the GNU Lesser General Public Licence. This should 006 * be distributed with the code. If you do not have a copy, 007 * see: 008 * 009 * http://www.gnu.org/copyleft/lesser.html 010 * 011 * Copyright for this code is held jointly by the individual 012 * authors. These should be listed in @author doc comments. 013 * 014 * For more information on the BioJava project and its aims, 015 * or to join the biojava-l mailing list, visit the home page 016 * at: 017 * 018 * http://www.biojava.org/ 019 * 020 */ 021package org.biojava.nbio.structure.align.ce; 022 023import org.biojava.nbio.structure.align.util.ConfigurationException; 024 025public interface UserArgumentProcessor { 026 027 028 /** Process user arguments that have been provided from the command line 029 * 030 * @param argv 031 */ 032 public void process(String[] argv) throws ConfigurationException; 033 034 /** 035 * Print help about the arguments 036 * @return 037 */ 038 public String printHelp(); 039}