001/*
002 *                    BioJava development code
003 *
004 * This code may be freely distributed and modified under the
005 * terms of the GNU Lesser General Public Licence.  This should
006 * be distributed with the code.  If you do  t have a copy,
007 * see:
008 *
009 *      http://www.gnu.org/copyleft/lesser.html
010 *
011 * Copyright for this code is held jointly by the individual
012 * authors.  These should be listed in @author doc comments.
013 *
014 * For more information on the BioJava project and its aims,
015 * or to join the biojava-l mailing list, visit the home page
016 * at:
017 *
018 *      http://www.biojava.org/
019 *
020 * created at Aug 12, 2013
021 * Author: Andreas Prlic
022 */
023
024package org.biojava.nbio.structure.io.mmcif.model;
025
026/** Data items in the ENTITY_SRC_NAT category record details of
027                           the source from which the entity was obtained in cases
028                           where the entity was isolated directly from a natural tissue.
029 */
030public class EntitySrcNat {
031        String  common_name     ;
032        String  details ;
033        String  entity_id ;
034        String  genus    ;
035        String  pdbx_atcc       ;
036        String  pdbx_cell        ;
037        String  pdbx_cell_line ;
038        String  pdbx_cellular_location;
039        String  pdbx_fragment    ;
040        String  pdbx_ncbi_taxonomy_id;
041        String  pdbx_organ       ;
042        String  pdbx_organelle;
043        String  pdbx_organism_scientific;
044        String  pdbx_plasmid_details     ;
045        String  pdbx_plasmid_name        ;
046        String  pdbx_secretion   ;
047        String  pdbx_variant     ;
048        String  pdbx_src_id;
049        String  pdbx_alt_source_flag;
050        String  pdbx_beg_seq_num;
051        String  pdbx_end_seq_num;
052        String  pdbx_leaving_atom_flag;
053        String  species  ;
054        String  strain   ;
055        String  tissue   ;
056        String  tissue_fraction;
057
058        public String getCommon_name() {
059                return common_name;
060        }
061        public void setCommon_name(String common_name) {
062                this.common_name = common_name;
063        }
064        public String getDetails() {
065                return details;
066        }
067        public void setDetails(String details) {
068                this.details = details;
069        }
070        public String getEntity_id() {
071                return entity_id;
072        }
073        public void setEntity_id(String entity_id) {
074                this.entity_id = entity_id;
075        }
076        public String getGenus() {
077                return genus;
078        }
079        public void setGenus(String genus) {
080                this.genus = genus;
081        }
082        public String getPdbx_atcc() {
083                return pdbx_atcc;
084        }
085        public void setPdbx_atcc(String pdbx_atcc) {
086                this.pdbx_atcc = pdbx_atcc;
087        }
088        public String getPdbx_cell() {
089                return pdbx_cell;
090        }
091        public void setPdbx_cell(String pdbx_cell) {
092                this.pdbx_cell = pdbx_cell;
093        }
094        public String getPdbx_cell_line() {
095                return pdbx_cell_line;
096        }
097        public void setPdbx_cell_line(String pdbx_cell_line) {
098                this.pdbx_cell_line = pdbx_cell_line;
099        }
100        public String getPdbx_cellular_location() {
101                return pdbx_cellular_location;
102        }
103        public void setPdbx_cellular_location(String pdbx_cellular_location) {
104                this.pdbx_cellular_location = pdbx_cellular_location;
105        }
106        public String getPdbx_fragment() {
107                return pdbx_fragment;
108        }
109        public void setPdbx_fragment(String pdbx_fragment) {
110                this.pdbx_fragment = pdbx_fragment;
111        }
112        public String getPdbx_ncbi_taxonomy_id() {
113                return pdbx_ncbi_taxonomy_id;
114        }
115        public void setPdbx_ncbi_taxonomy_id(String pdbx_ncbi_taxonomy_id) {
116                this.pdbx_ncbi_taxonomy_id = pdbx_ncbi_taxonomy_id;
117        }
118        public String getPdbx_organ() {
119                return pdbx_organ;
120        }
121        public void setPdbx_organ(String pdbx_organ) {
122                this.pdbx_organ = pdbx_organ;
123        }
124        public String getPdbx_organelle() {
125                return pdbx_organelle;
126        }
127        public void setPdbx_organelle(String pdbx_organelle) {
128                this.pdbx_organelle = pdbx_organelle;
129        }
130        public String getPdbx_organism_scientific() {
131                return pdbx_organism_scientific;
132        }
133        public void setPdbx_organism_scientific(String pdbx_organism_scientific) {
134                this.pdbx_organism_scientific = pdbx_organism_scientific;
135        }
136        public String getPdbx_plasmid_details() {
137                return pdbx_plasmid_details;
138        }
139        public void setPdbx_plasmid_details(String pdbx_plasmid_details) {
140                this.pdbx_plasmid_details = pdbx_plasmid_details;
141        }
142        public String getPdbx_plasmid_name() {
143                return pdbx_plasmid_name;
144        }
145        public void setPdbx_plasmid_name(String pdbx_plasmid_name) {
146                this.pdbx_plasmid_name = pdbx_plasmid_name;
147        }
148        public String getPdbx_secretion() {
149                return pdbx_secretion;
150        }
151        public void setPdbx_secretion(String pdbx_secretion) {
152                this.pdbx_secretion = pdbx_secretion;
153        }
154        public String getPdbx_variant() {
155                return pdbx_variant;
156        }
157        public void setPdbx_variant(String pdbx_variant) {
158                this.pdbx_variant = pdbx_variant;
159        }
160        public String getSpecies() {
161                return species;
162        }
163        public void setSpecies(String species) {
164                this.species = species;
165        }
166        public String getStrain() {
167                return strain;
168        }
169        public void setStrain(String strain) {
170                this.strain = strain;
171        }
172        public String getTissue() {
173                return tissue;
174        }
175        public void setTissue(String tissue) {
176                this.tissue = tissue;
177        }
178        public String getTissue_fraction() {
179                return tissue_fraction;
180        }
181        public void setTissue_fraction(String tissue_fraction) {
182                this.tissue_fraction = tissue_fraction;
183        }
184
185        public String getPdbx_src_id() {
186                return pdbx_src_id;
187        }
188
189        public void setPdbx_src_id(String pdbx_src_id) {
190                this.pdbx_src_id = pdbx_src_id;
191        }
192
193        public String getPdbx_alt_source_flag() {
194                return pdbx_alt_source_flag;
195        }
196
197        public void setPdbx_alt_source_flag(String pdbx_alt_source_flag) {
198                this.pdbx_alt_source_flag = pdbx_alt_source_flag;
199        }
200
201        public String getPdbx_beg_seq_num() {
202                return pdbx_beg_seq_num;
203        }
204
205        public void setPdbx_beg_seq_num(String pdbx_beg_seq_num) {
206                this.pdbx_beg_seq_num = pdbx_beg_seq_num;
207        }
208
209        public String getPdbx_end_seq_num() {
210                return pdbx_end_seq_num;
211        }
212
213        public void setPdbx_end_seq_num(String pdbx_end_seq_num) {
214                this.pdbx_end_seq_num = pdbx_end_seq_num;
215        }
216
217        public String getPdbx_leaving_atom_flag() {
218                return pdbx_leaving_atom_flag;
219        }
220
221        public void setPdbx_leaving_atom_flag(String pdbx_leaving_atom_flag) {
222                this.pdbx_leaving_atom_flag = pdbx_leaving_atom_flag;
223        }
224}