001/* 002 * BioJava development code 003 * 004 * This code may be freely distributed and modified under the 005 * terms of the GNU Lesser General Public Licence. This should 006 * be distributed with the code. If you do not have a copy, 007 * see: 008 * 009 * http://www.gnu.org/copyleft/lesser.html 010 * 011 * Copyright for this code is held jointly by the individual 012 * authors. These should be listed in @author doc comments. 013 * 014 * For more information on the BioJava project and its aims, 015 * or to join the biojava-l mailing list, visit the home page 016 * at: 017 * 018 * http://www.biojava.org/ 019 * 020 * created at May 31, 2008 021 */ 022package org.biojava.nbio.structure.io.mmcif.model; 023 024public class StructRefSeq extends AbstractBean{ 025 String align_id; 026 String ref_id; 027 String pdbx_PDB_id_code; 028 String pdbx_strand_id; 029 String seq_align_beg; 030 String pdbx_seq_align_beg_ins_code; 031 String seq_align_end; 032 String pdbx_seq_align_end_ins_code; 033 String pdbx_db_accession; 034 String db_align_beg; 035 String pdbx_db_align_beg_ins_code; 036 String db_align_end; 037 String pdbx_db_align_end_ins_code; 038 String pdbx_auth_seq_align_beg; 039 String pdbx_auth_seq_align_end; 040 String details; 041 042 public StructRefSeq(){ 043 super(); 044 pdbx_db_align_beg_ins_code = "?"; 045 pdbx_db_align_end_ins_code = "?"; 046 047 } 048 049 public String getAlign_id() { 050 return align_id; 051 } 052 public void setAlign_id(String align_id) { 053 this.align_id = align_id; 054 } 055 public String getRef_id() { 056 return ref_id; 057 } 058 public void setRef_id(String ref_id) { 059 this.ref_id = ref_id; 060 } 061 public String getPdbx_PDB_id_code() { 062 return pdbx_PDB_id_code; 063 } 064 public void setPdbx_PDB_id_code(String pdbx_PDB_id_code) { 065 this.pdbx_PDB_id_code = pdbx_PDB_id_code; 066 } 067 public String getPdbx_strand_id() { 068 return pdbx_strand_id; 069 } 070 public void setPdbx_strand_id(String pdbx_strand_id) { 071 this.pdbx_strand_id = pdbx_strand_id; 072 } 073 public String getSeq_align_beg() { 074 return seq_align_beg; 075 } 076 public void setSeq_align_beg(String seq_align_beg) { 077 this.seq_align_beg = seq_align_beg; 078 } 079 public String getPdbx_seq_align_beg_ins_code() { 080 return pdbx_seq_align_beg_ins_code; 081 } 082 public void setPdbx_seq_align_beg_ins_code(String pdbx_seq_align_beg_ins_code) { 083 this.pdbx_seq_align_beg_ins_code = pdbx_seq_align_beg_ins_code; 084 } 085 public String getSeq_align_end() { 086 return seq_align_end; 087 } 088 public void setSeq_align_end(String seq_align_end) { 089 this.seq_align_end = seq_align_end; 090 } 091 public String getPdbx_seq_align_end_ins_code() { 092 return pdbx_seq_align_end_ins_code; 093 } 094 public void setPdbx_seq_align_end_ins_code(String pdbx_seq_align_end_ins_code) { 095 this.pdbx_seq_align_end_ins_code = pdbx_seq_align_end_ins_code; 096 } 097 public String getPdbx_db_accession() { 098 return pdbx_db_accession; 099 } 100 public void setPdbx_db_accession(String pdbx_db_accession) { 101 this.pdbx_db_accession = pdbx_db_accession; 102 } 103 public String getDb_align_beg() { 104 return db_align_beg; 105 } 106 public void setDb_align_beg(String db_align_beg) { 107 this.db_align_beg = db_align_beg; 108 } 109 public String getPdbx_db_align_beg_ins_code() { 110 return pdbx_db_align_beg_ins_code; 111 } 112 public void setPdbx_db_align_beg_ins_code(String pdbx_db_align_beg_ins_code) { 113 this.pdbx_db_align_beg_ins_code = pdbx_db_align_beg_ins_code; 114 } 115 public String getDb_align_end() { 116 return db_align_end; 117 } 118 public void setDb_align_end(String db_align_end) { 119 this.db_align_end = db_align_end; 120 } 121 public String getPdbx_db_align_end_ins_code() { 122 return pdbx_db_align_end_ins_code; 123 } 124 public void setPdbx_db_align_end_ins_code(String pdbx_db_align_end_ins_code) { 125 this.pdbx_db_align_end_ins_code = pdbx_db_align_end_ins_code; 126 } 127 public String getPdbx_auth_seq_align_beg() { 128 return pdbx_auth_seq_align_beg; 129 } 130 public void setPdbx_auth_seq_align_beg(String pdbx_auth_seq_align_beg) { 131 this.pdbx_auth_seq_align_beg = pdbx_auth_seq_align_beg; 132 } 133 public String getPdbx_auth_seq_align_end() { 134 return pdbx_auth_seq_align_end; 135 } 136 public void setPdbx_auth_seq_align_end(String pdbx_auth_seq_align_end) { 137 this.pdbx_auth_seq_align_end = pdbx_auth_seq_align_end; 138 } 139 public String getDetails() { 140 return details; 141 } 142 public void setDetails(String details) { 143 this.details = details; 144 } 145 146}