001/** 002 * BioJava development code 003 * 004 * This code may be freely distributed and modified under the 005 * terms of the GNU Lesser General Public Licence. This should 006 * be distributed with the code. If you do not have a copy, 007 * see: 008 * 009 * http://www.gnu.org/copyleft/lesser.html 010 * 011 * Copyright for this code is held jointly by the individual 012 * authors. These should be listed in @author doc comments. 013 * 014 * For more information on the BioJava project and its aims, 015 * or to join the biojava-l mailing list, visit the home page 016 * at: 017 * 018 * http://www.biojava.org/ 019 * 020 * Created on Aug 31, 2011 021 * Created by Andreas Prlic 022 * 023 * @since 3.0.2 024 */ 025package org.biojava.nbio.structure.scop.server; 026 027import javax.xml.bind.JAXBContext; 028import javax.xml.bind.Marshaller; 029import javax.xml.bind.Unmarshaller; 030import javax.xml.bind.annotation.XmlAccessType; 031import javax.xml.bind.annotation.XmlAccessorType; 032import javax.xml.bind.annotation.XmlRootElement; 033import java.io.ByteArrayInputStream; 034import java.io.ByteArrayOutputStream; 035import java.io.PrintStream; 036import java.io.Serializable; 037import java.util.ArrayList; 038import java.util.List; 039 040 041 042@XmlRootElement(name = "TreeSetStringWrapper", namespace ="http://source.rcsb.org") 043@XmlAccessorType(XmlAccessType.PUBLIC_MEMBER) 044public class ListStringWrapper implements Serializable{ 045 046 047 /** 048 * 049 */ 050 private static final long serialVersionUID = 4193799052494327416L; 051 List<String> data; 052 053 static JAXBContext jaxbContext; 054 static { 055 try { 056 jaxbContext= JAXBContext.newInstance(ListStringWrapper.class); 057 } catch (Exception e){ 058 throw new RuntimeException("Could not initialize JAXB context for " + ListStringWrapper.class, e); 059 } 060 } 061 062 public ListStringWrapper(){ 063 data = new ArrayList<String>(); 064 } 065 066 public List<String> getData() { 067 return data; 068 } 069 070 public void setData(List<String> data) { 071 this.data = data; 072 } 073 public String toXML(){ 074 075 ByteArrayOutputStream baos = new ByteArrayOutputStream(); 076 077 PrintStream ps = new PrintStream(baos); 078 079 try { 080 081 Marshaller m = jaxbContext.createMarshaller(); 082 083 m.setProperty(Marshaller.JAXB_FORMATTED_OUTPUT, Boolean.TRUE); 084 085 m.marshal( this, ps); 086 087 088 } catch (Exception e){ 089 throw new RuntimeException("Could not convert " + getClass() + " to XML", e); 090 } 091 092 return baos.toString(); 093 094 } 095 096 public static ListStringWrapper fromXML(String xml){ 097 098 ListStringWrapper job = null; 099 100 try { 101 102 Unmarshaller un = jaxbContext.createUnmarshaller(); 103 104 ByteArrayInputStream bais = new ByteArrayInputStream(xml.getBytes()); 105 106 job = (ListStringWrapper) un.unmarshal(bais); 107 108 } catch (Exception e){ 109 throw new RuntimeException("Could not parse " + ListStringWrapper.class + " from XML", e); 110 } 111 112 return job; 113 } 114 115 116}