Uses of Interface
org.biojava.nbio.core.alignment.matrices.AAIndexProvider

Packages that use AAIndexProvider

Package	Description
org.biojava.nbio.core.alignment.matrices

Uses of AAIndexProvider in org.biojava.nbio.core.alignment.matrices

Classes in org.biojava.nbio.core.alignment.matrices that implement AAIndexProvider

Modifier and Type	Class	Description
class	DefaultAAIndexProvider	The default provider for AAINDEX loads substitution matrices from the AAINDEX file in the resources directory

Methods in org.biojava.nbio.core.alignment.matrices that return AAIndexProvider

Modifier and Type	Method	Description
static AAIndexProvider	AAindexFactory.getAAIndexProvider()	Gets singleton instance of an AAIndexProvider, always non-null

Methods in org.biojava.nbio.core.alignment.matrices with parameters of type AAIndexProvider

Modifier and Type	Method	Description
static void	AAindexFactory.setAAIndexProvider(AAIndexProvider provider)	Sets the singleton provider.